Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1367 255 7e-63 seq1789 113 6e-20 >seq1367 Length=27082 Score = 255 bits (282), Expect = 7e-63 Identities = 1163/1815 (64%), Gaps = 53/1815 (3%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 |||||||||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 9416 CGGAGATAGTACATGCCGGTCTTGAGGCCAAGCTTCCA-GCCAGCAAAGTGCATGGATGT 9358 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATG 110479 || |||| ||| ||||| | |||| || ||| | ||| |||| | |||||| Sbjct 9357 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT--GATCAATG 9300 Query 110480 AAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTG 110537 ||| || || | || ||||| | | || | | | | | || ||||| || | Sbjct 9299 AAGGCACCACGGTCAGCAGCCATCTGGACGA--TGGTGCGCTGGGAGATCTCCCAGACGG 9242 Query 110538 TGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCG 110597 | ||||| ||||||||| | ||||| | | ||| ||||||||||| || || Sbjct 9241 TCTTGTAGAGGGCCTTGATATCGGCAGGGATGTTGGGGATGTTCTGGATGGAGCCACCGT 9182 Query 110598 CCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGA 110657 || | || ||| |||||| | | ||||| || || || | | ||| |||| Sbjct 9181 CCGCGATGATACGATTCTTCATGTTGTCAGACCAAAGGCCCATGTCGACCAAGTCCTTGA 9122 Query 110658 ----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATG 110713 | ||| | ||||||| ||||| || || ||| | | | ||||||| Sbjct 9121 GCAACCAGGGG----TTGACAACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAGATG 9066 Query 110714 TTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 110773 || | |||||||| || ||||| || || || | || || | |||||| || || Sbjct 9065 TTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTG 9006 Query 110774 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGA 110833 ||||| || || | | ||| ||| || | ||| | || |||||| | | |||||| Sbjct 9005 GGCATGGGAGCAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCTTTGAGA 8946 Query 110834 ACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCC 110892 |||||||| | | | | || | || |||||||||| |||| ||| | || Sbjct 8945 GAGTCCCAGTCCCACAGGTCGGTAGGGGTAACGC-CCCACATGTCGTACTGGAGCTCTCC 8887 Query 110893 TTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-AC 110951 | ||| | ||||| ||||| |||| || || | || || | |||| || || Sbjct 8886 CTTCGACACTGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCAC 8827 Query 110952 AGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGG 111011 || || || | | |||| || ||||| |||||||| | | || | ||||| Sbjct 8826 AGAG-GCGGTCAAAGCTCCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGG 8768 Query 111012 CTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 111071 | || || || || | |||| | ||| |||| || ||||| || |||| Sbjct 8767 CCTCTGGGGAGTCGAAAGGAAGGCGGAGGGCTAGGAATGCATCAGCAAGACCCTGGACAC 8708 Query 111072 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAA 111128 | | | ||| || ||||| || | || | ||| | ||| ||||| || Sbjct 8707 CGACAGCAACTGGCCTGTGACGGAAGTTGC---TGCGCCTGGCCTCTTCGACGGGGTAGT 8651 Query 111129 AATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTT 111188 | || |||||||| ||| | || ||| |||| || ||||| || || || | Sbjct 8650 AGTTGACGTCAATGATCTTGTTCAAGTTCTTGACGACAACCTGTGTGACCTCGTGGAGCT 8591 Query 111189 TTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCA 111248 | | |||| | |||| | | | || || |||| ||||| | || |||| Sbjct 8590 TCTGGAAATCGTATGTGCCGTTGGCCATGTCAACGTATGTTGGCAGGGCAAGGGACGCCA 8531 Query 111249 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGG 111308 | || || || || |||||| | | |||||| | ||| || || || | ||||| Sbjct 8530 AGTTACACACGGCAACCTCATCAGGGGCAGAGTACTCGACAATCTCAGTGCACAGGTTGG 8471 Query 111309 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368 | || || || || | ||||| ||||| ||||| |||||| ||||||||||| | Sbjct 8470 AGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACA 8411 Query 111369 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCG 111427 |||| |||| | || ||||| ||||| || | |||||| | | ||||| | || | | Sbjct 8410 ACATGAAGGGGTTTCCTGTCTCGGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGG 8351 Query 111428 GCTGGTACAATGGCGTTGG--CCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 111484 || | |||| ||| ||| | |||||| |||||| | |||||| || || Sbjct 8350 CCTTG----ATGGTCTTGCGTCCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGCGCCTCG 8295 Query 111485 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCA 111543 ||||| || || |||| | | || || || || || || || | || | ||| Sbjct 8294 AACTCATCGCCATAAACGTCCGCCAACCCAGG-GCATTCGTTGGGGCACATGAGGGTCCA 8236 Query 111544 TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 111603 | ||| | ||| || ||||||||||| || || || ||||| || | | || | Sbjct 8235 GTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAA 8176 Query 111604 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 111663 || | || | || || | || ||||| || | || |||||||| | | Sbjct 8175 GTCACGGGCGCGGACTTCCTCCTTTCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAACAC 8116 Query 111664 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGC 111717 |||||||||||||||||||| |||| |||| || || ||||| ||| | Sbjct 8115 ATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCGCCGG---GACGCTTGTTGCCACC 8059 Query 111718 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 111777 || | || || | || ||| ||| || || || ||||| |||| |||||| | || Sbjct 8058 CTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATGGGAACAATACCGTTCGA 7999 Query 111778 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 111837 | || || || || ||| | | |||| | | | ||||||| || || Sbjct 7998 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATGTTCAATCC 7939 Query 111838 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 111897 ||||| || || ||||||||| |||||| | | ||||| |||||||||| | Sbjct 7938 GATACCTCCGGCAGTCTTTGAGATCATGGCACACGTCTTGAGAGTGTCATAGATACCCTC 7879 Query 111898 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTAC 111956 || |||||||| || ||| | |||||| |||| ||| || || |||||||| Sbjct 7878 AATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTG-GGCCTGTGGTGTAC 7820 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTA 112014 ||||||||||||| || || | ||||| |||| || ||||| ||||| || ||| Sbjct 7819 CAGCATTGAAGAGTGTGGGGGAAGCGTGTGTGAA-GTA-CTTGGAAGACATGAGGTTGTA 7762 Query 112015 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACAT 112074 |||||| | | ||||| || || ||||| ||||| | || || ||||| | ||| Sbjct 7761 TGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCAT 7702 Query 112075 GTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGT 112134 || ||| || | || | ||||||| || || |||| ||| | |||||||||| Sbjct 7701 GTGCTGCGGCCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGGTAGGACCTCTCAAGGGT 7642 Query 112135 TTTGAGACCAAAGTA 112149 |||| |||||||| Sbjct 7641 CTTGAAGCCAAAGTA 7627 >seq1789 Length=64549 Score = 113 bits (124), Expect = 6e-20 Identities = 336/510 (66%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || |||||| || || | |||||| || Sbjct 52320 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTAAGGCCAGCCATGAGGCC 52261 Query 122730 CCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 122788 |||||||| | ||| |||| | ||| || || |||||||||||||||||||| || Sbjct 52260 ACGCTTCTTGAGCCAGAAAATGGATGCA-AAGGAGCCGGAGAAGAAGATACCCTCGACGG 52202 Query 122789 ACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTG 122848 ||||| |||| ||||| | |||||||| | ||| | | | ||| | | || Sbjct 52201 CGGCAAAGGCAACGAGGCGCTGGGCGAAGGTAGAATCCTTGTCTTGGATCCACCTGACTG 52142 Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCT 122908 |||| | |||||||||| ||| || || | ||| | ||||| | || | | | Sbjct 52141 CCCAGTCGGCCTTCTTCTTAATGCAAGGAATAGTCTCAATGGCATTGAAGAGGTATGTGC 52082 Query 122909 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCA 122968 || || ||||| |||||| |||| || | || ||||| ||| | |||| Sbjct 52081 GTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 52022 Query 122969 TTTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCC 123027 | || || || | ||| | ||||||| |||| || || || || |||||| | Sbjct 52021 TCTCGATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATTTGGACCTCA-CT 51964 Query 123028 GCAAAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAG 123086 || || ||| || ||||| |||||||| || || | || ||||| || || Sbjct 51963 GCTGAAGCGTTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCGAAGAAAGCGAG 51904 Query 123087 GATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATC 123143 | || ||||| | |||| || || | || | |||||||||| ||| || Sbjct 51903 AACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAGTCGTGAAGGTC 51844 Query 123144 TTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | |||| || || || ||||| Sbjct 51843 CTTGGAAAGGTCAATCTCCTCTGCGGTCCA 51814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628015467057600