Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1271 145 2e-29 seq1408 134 4e-26 seq1998 87.8 5e-12 seq1650 84.2 7e-11 >seq1271 Length=16661 Score = 145 bits (160), Expect = 2e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| | ||| || || ||||| || ||||| || | Sbjct 15282 TTTGCATACCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGT 15223 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| || | || || ||||||||||| | ||| ||||| | Sbjct 15222 AGTCCGACAGGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGT 15163 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || || || |||||||| | || || || ||||| | |||||||| Sbjct 15162 CCGGGGGAATGCCCTCCTTGTCTTGAATTTTGGACTTGACGTTGTCAATGGTATCAGATG 15103 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || |||| ||||| || || || || || || ||||||||||| Sbjct 15102 ACTCGACCTCCAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 15048 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||||||||| || |||||||| || || || || ||||| Sbjct 15506 CATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATC 15447 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || || || || || || || || ||||| || || Sbjct 15446 AGACAGAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGG 15387 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || ||||| || || || | || || ||||| |||| ||| || | || Sbjct 15386 GGGGATACCCTCCTTATCTTGGATCTTCGACTTGACGTTATCGATCGTATCCGACGACTC 15327 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || |||| ||||||||||| || || || || || || ||||| Sbjct 15326 GACTTCCAGCGTAATCGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15276 Score = 114 bits (126), Expect = 4e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || ||||| || ||||| || || || Sbjct 15050 CATACCACCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTC 14991 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || |||||||||||||| || || ||||| || || Sbjct 14990 GGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGG 14931 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || | || ||||| || || | || || | || Sbjct 14930 GGGAATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTC 14871 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || | ||||| || || || || || || || |||||||| Sbjct 14870 GACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 14820 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | |||||||| ||| || || || || || || Sbjct 15730 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 15671 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || | ||||| || || || || |||||||| || || || ||||| || || || Sbjct 15670 AGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGG 15611 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || || || ||||||||||| || | || || || ||||| | ||||| | ||||| Sbjct 15610 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACC 15551 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || |||| ||||||||||| || || || || ||||||||||| Sbjct 15550 TCGAGAGTAATGGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || ||||| || || ||||| || || Sbjct 14822 CATACCACCACGCAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTC 14763 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || |||||||| ||||| || ||||| ||||||||||| || || Sbjct 14762 GGAGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGG 14703 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 || ||||| || || || || || || ||| || || || || || | ||| || | | Sbjct 14702 GGGGATTCCCTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTATCGGAGGACT 14644 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 |||| || || || | ||||| || || Sbjct 14643 CAACCTCGAGGGTGATGGTCTTGCCAGT 14616 >seq1408 Length=33187 Score = 134 bits (148), Expect = 4e-26 Identities = 705/1120 (63%), Gaps = 13/1120 (1%) Strand=Plus/Minus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 || || |||||||| ||||| || || || || || | | | | | |||| || | Sbjct 31617 ATCGGTATCGATTTGGGTACCACCTACTCGTGCGTGGGTATCTTCAGAGATGACCGCATT 31558 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || ||||| || || || || ||| | ||||| ||||| | |||||| || || || Sbjct 31557 GAGATCATTGCCAACGACCAGGGCAACCGCACAACCCCATCGTTCGTTGCCTTCACTGAC 31498 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || |||||| |||| |||||| | || || || |||| || || || | || || Sbjct 31497 ACCGAGCGTCTGATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCACCAACACC 31438 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATC 349437 || || || |||||||| || || ||| | | || | ||| | || || | Sbjct 31437 GTCTTCGACGCTAAGCGTCTGATCGGTCGCAAGTTCGCCGACGCTGAGGTC----CAGGC 31382 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | || || || || || | | | || | ||| | | | | || | | Sbjct 31381 CGACATGAAGCACTTCCCCTTCAA-GATCATCGACAAGGCCGGCA--AGCCTGTCTGCCA 31325 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 ||| || | || || || || | || |||||| || || || || ||| | | Sbjct 31324 GGTCGAGTTCAAGGGCGAGACCAAGGAGTTCACACCCGAGGAGATCTCCTCCATGATCCT 31265 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || || ||| || | |||||| || || | |||| | | || | | || ||| | Sbjct 31264 CGTCAAGATGCGCGAGACTGCTGAGGCCTACCTCGGTGGATCCGTCAACAACGCCGTTGT 31205 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || || ||||| || || || |||||||| || || || ||||| || ||| Sbjct 31204 CACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTCTCAT 31145 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 || || | || || || | || || || || || || || || || || || || || Sbjct 31144 CGCCGGACTCAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATCGCTTACGG 31085 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 ||||| || | | || || || | || || || ||| | ||||||||||| Sbjct 31084 TCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTCCTGATCTTCGATCTTGGTGGTGGTAC 31025 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||| ||||| || || || || | || ||||| || || || || || | ||||| || Sbjct 31024 TTTCGATGTCTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGG 30965 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 ||| || || | ||||| || ||||| || || |||||||| || || || || || Sbjct 30964 TGACACTCACTTGGGTGGTGAGGATTTCGACAACCGTCTCGTCAACCACTTCGTCAACGA 30905 Query 349918 ATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAG 349977 || ||| | || ||| | ||| | || | | || | ||||| || | Sbjct 30904 GTTCAAGAGAAAACATAAGAAGGATCTCTCGTCCAACGCCCGTGCCCTCCGTCGTCTCCG 30845 Query 349978 AACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAAT 350037 || || || || ||||| ||||| | | || || || |||| ||||| || || || Sbjct 30844 CACAGCATGCGAGCGTGCCAAGCGCACTCTTTCGTCCTCTGCCCAGACCTCCATCGAGAT 30785 Query 350038 TGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGA 350097 || ||||| || || || |||| | || || || ||||| || ||||| || Sbjct 30784 CGACTCTCTCTTCGAGGGTGTTGACTTCTACACCTCCATCACCCGTGCCCGCTTTGAGGA 30725 Query 350098 ATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGC 350157 | || |||||| || | | || | | || || || || | ||| || Sbjct 30724 GCTGTGCCAGGATCTCTTCCGCTCCACCCTCCAGCCCGTCGACCGTGTCCTCTCAGACGC 30665 Query 350158 AAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCC 350217 || || ||| | || | | || | || | || || ||||| || ||||| || Sbjct 30664 CAAGATCGACAAGACCAAGGTCCACGAGATCGTCCTCGTCGGAGGTTCCACCCGTATCCC 30605 Query 350218 AAAAGTTCA-ACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTA 350276 || | | || | | | | | | || | || || ||||| || || | || || | Sbjct 30604 AAGAATCCAGAGACTCA-TCACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCCATCA 30546 Query 350277 ATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 | || ||||| |||||||| || |||||||| || ||||| Sbjct 30545 ACCCCGATGAGGCTGTTGCGTACGGTGCTGCCGTGCAGGC 30506 >seq1998 Length=119039 Score = 87.8 bits (96), Expect = 5e-12 Identities = 102/137 (74%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || |||||||| | || || ||| || || | |||||||| || |||||||| || Sbjct 11990 CGCGGCACACCGAGAGTGACGTTC---TTGGACGACACACCAGCGAAATGGAAAGTGTTG 11934 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | || |||| ||||||||||| ||||| || |||| || |||||||| || Sbjct 11933 AGCGTCATCTGCGTAGCAGGCTCACCAATAGACTGGGCCGCAAGAATACCAACCATCTCG 11874 Query 377578 CCAGGATTGACAATAGC 377594 ||||| ||||| | ||| Sbjct 11873 CCAGGGTTGACCAGAGC 11857 >seq1650 Length=88388 Score = 84.2 bits (92), Expect = 7e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | || || ||||| ||||| || || ||||||||||| Sbjct 72837 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATC 72896 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 || |||||||| || || |||||||| || || || || || || | || ||||| || Sbjct 72897 AGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 72956 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || | || || | || || ||||| || | ||||| || || Sbjct 72957 ATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGT 73000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515213513701118