Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1271 140 3e-28 >seq1271 Length=16661 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | ||||| || || || || | || Sbjct 15048 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTGGAGGTCGAGTCATCT 15107 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| |||||||||||||| || ||||| || || || || Sbjct 15108 GATACCATTGACAACGTCAAGTCCAAAATTCAAGACAAGGAGGGCATTCCCCCGGACCAG 15167 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | || || || || ||||| || | ||| | || || |||||| Sbjct 15168 CAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCCTGTCGGACTACAAC 15227 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||||||| | ||||||||| | ||| | || ||||| || Sbjct 15228 ATTCAGAAGGAGTCGACCCTGCATTTGGTTCTCCGTCTTCGTGGTGGTAT 15277 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| ||||| ||| | ||||| || ||||| || |||| Sbjct 15276 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACGATTACGCTGGAAGTCGAGTCGTCG 15335 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | ||||| || || ||||| || || || || || || || || Sbjct 15336 GATACGATCGATAACGTCAAGTCGAAGATCCAAGATAAGGAGGGTATCCCCCCGGACCAG 15395 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | || || | || | || ||||||||| Sbjct 15396 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACTCTGTCTGATTACAAC 15455 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || ||||| | ||| | || | || ||||| || Sbjct 15456 ATCCAGAAGGAGTCTACGCTACATCTTGTTCTCCGCCTCCGTGGTGGTAT 15505 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || ||| | || || || ||||| Sbjct 14820 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCC 14879 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || || || || || || || Sbjct 14880 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 14939 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || | || || || || | ||||| |||||| Sbjct 14940 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 14999 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | || ||||| | ||| | || ||||| || Sbjct 15000 ATTCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTCTTCGTGGTGGTAT 15049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434906950773120