Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1367 156 6e-33 seq1789 96.9 5e-15 >seq1367 Length=27082 Score = 156 bits (172), Expect = 6e-33 Identities = 404/613 (66%), Gaps = 2/613 (0%) Strand=Plus/Minus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 || || ||||| || |||| || |||| ||||||||||| || |||||||| | | | Sbjct 8297 TCGAACTCATCGCCATAAACGTCCGCCAACCCAGGGCATTCGTTGGGGCACATGAGGGTC 8238 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 |||||||| | | || || || ||||| |||||||| || ||||| ||||| || Sbjct 8237 CAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAAC 8178 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | || |||| | ||| || ||||| |||||| | || || || ||||| | Sbjct 8177 AAGTCACGGGCGCGGACTTCCTCCTTTCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAAC 8118 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| | |||||||| || | || || || | | | || || || || || || ||| Sbjct 8117 ACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACCC 8058 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | ||||| || ||||| || | || | | ||| |||| ||||||||| || Sbjct 8057 TGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATGGGAACAATACCGTTCGAG 7998 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 |||| || || || | ||| || ||| | || || ||| ||| | || Sbjct 7997 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATGTTCAATCCG 7938 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT-TTCAATGTATCGTAGATACCCTC 78343 || ||||| || |||| || || | || | |||| || | || || ||||||||||| Sbjct 7937 ATACCTCCGGCAGTCTTTGAGATCATGGCAC-ACGTCTTGAGAGTGTCATAGATACCCTC 7879 Query 78344 TATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 78403 || || || ||| |||||| | | || ||| |||| || || || || Sbjct 7878 AATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACC 7819 Query 78404 TGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGT 78463 ||||| || | ||| || || || || || || | || ||| | || |||||||| Sbjct 7818 AGCATTGAAGAGTGTGGGGGAAGCGTGTGTGAAGTACTTGGAAGACATGAGGTTGTATGT 7759 Query 78464 TTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATG 78523 || || | || || ||| ||||| || || || |||||||| | ||| || Sbjct 7758 CTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATGTG 7699 Query 78524 CTGAGGTCTTTCA 78536 ||| || || ||| Sbjct 7698 CTGCGGCCTCTCA 7686 >seq1789 Length=64549 Score = 96.9 bits (106), Expect = 5e-15 Identities = 336/520 (65%), Gaps = 16/520 (3%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || || || || | ||| || ||||| || |||||||| || || | || Sbjct 52292 TCGTTCGAGAAGGTAAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCA 52233 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| || || || ||||| ||||| || || | || || | Sbjct 52232 AAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAAG 52173 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | || |||| | ||||||| |||||| || ||||||||||| | ||||| Sbjct 52172 GTAGAATCCTTGTCTTGGATCCACCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGA 52113 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCA--TTGCTATCTTTAACGTAAGTAT 48417 || || || || ||||| ||||| | | || | ||| || || | ||| || | Sbjct 52112 ATAGTCTCAATGGCATTGAAGAGGTATGTGCGTTGAGCCTGC--TCCTTGATGTATGTGT 52055 Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477 | || | || || | |||| |||||| || || || || || || ||||| | Sbjct 52054 CGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGA 51995 Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537 | || | || |||| ||| || ||||| | | || ||||| | ||||| || | Sbjct 51994 AGCAGCGGGCCTCTGGGATTTGGACCTCACTGCTGAAGCGTTCGAGGAGGTTCTCGTTGA 51935 Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATA------TTTTT 48591 | ||||| ||| || || || || || | || || || || || | | Sbjct 51934 CAATTCCGTCAGAGGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGT 51875 Query 48592 CGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTG 48651 ||||| || | | || |||||||| | | || || || | || | || || || | Sbjct 51874 CGTTG--AGAC-GGTTGTTCCAGTCGTGAAGGTCCTTGGAAAGGTCAATCTCCTCTGCGG 51818 Query 48652 TCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 |||| || |||||||| || || || ||||| | ||| || Sbjct 51817 TCCAGAAAGATGCCTCGGCCTTCTTGTACATCTGCCAGAT 51778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694650512843840