Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1523 156 1e-32 seq1271 143 6e-29 seq1650 129 1e-24 >seq1523 Length=98661 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 96213 CAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGAC 96272 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || ||||| || ||||||||||| Sbjct 96273 ACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 96332 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || ||| | || || ||| || Sbjct 96333 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACAACATC 96392 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || |||||||| Sbjct 96393 CAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTC 96428 >seq1271 Length=16661 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| ||||| ||||| || || || || || || || Sbjct 15279 CAAATCTTCGTCAAGACTCTCACCGGAAAGACGATTACGCTGGAAGTCGAGTCGTCGGAT 15338 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || || || || || ||||| ||||||||||| Sbjct 15339 ACGATCGATAACGTCAAGTCGAAGATCCAAGATAAGGAGGGTATCCCCCCGGACCAGCAG 15398 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || |||||||| ||||| | ||||| | ||||| ||| || Sbjct 15399 CGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACTCTGTCTGATTACAACATC 15458 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||||||||| Sbjct 15459 CAGAAGGAGTCTACGCTACATCTTGTT 15485 Score = 131 bits (144), Expect = 4e-25 Identities = 140/184 (76%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||||||||||| || ||| || |||||||| |||||||| Sbjct 14616 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACCATCGACAACGTCAAGAGC 14675 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| || ||||| || |||||||| |||||||||||||| || |||||||||||||| Sbjct 14676 AAGATCCAAGACAAGGAGGGAATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAAG 14735 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || || || || || | || || |||| || || |||| || || || || || || Sbjct 14736 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCACCCTCCA- 14794 Query 178125 CTTG 178128 |||| Sbjct 14795 CTTG 14798 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || ||||| || || || |||||||| || || ||| Sbjct 15507 CAGATTTTCGTCAAGACCCTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCTGAC 15566 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||||||||| || || || ||||| ||||||||||| Sbjct 15567 ACCATTGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAGCAG 15626 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||||| || ||||| ||||| || ||| || ||| || Sbjct 15627 CGCCTGATATTTGCTGGTAAGCAGCTGGAGGATGGCAGGACGCTGAGCGACTACAACATC 15686 Query 178104 CAAAAAGA 178111 || || || Sbjct 15687 CAGAAGGA 15694 Score = 118 bits (130), Expect = 3e-21 Identities = 150/205 (73%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| | ||||| || || ||| Sbjct 14823 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCCGAC 14882 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| || || || || ||||||||||| Sbjct 14883 ACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 14942 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| ||||| || ||||| | ||||| |||| || ||| | Sbjct 14943 CGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAACATT 15002 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 15003 CAGAAGGAGTCCACCCTCCA-CTTG 15026 Score = 107 bits (118), Expect = 5e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| || || || ||||| || || ||||| || || || Sbjct 15051 CAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTGGAGGTCGAGTCATCTGAT 15110 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| || ||||| ||||| || || || || ||||||||||| Sbjct 15111 ACCATTGACAACGTCAAGTCCAAAATTCAAGACAAGGAGGGCATTCCCCCGGACCAGCAG 15170 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||| | || ||||| | || || | || || ||| | Sbjct 15171 CGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCCTGTCGGACTACAACATT 15230 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || |||||| | ||| Sbjct 15231 CAGAAGGAGTCGACCCTGCATTTGGTT 15257 >seq1650 Length=88388 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || | || || || || |||||||| |||||||| || ||||| ||| Sbjct 73015 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACTATC 72956 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| || ||||| || ||||| || |||||||||||||| || Sbjct 72955 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGCCTG 72896 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || ||||| || |||||| | |||||| |||| || ||| |||| || Sbjct 72895 ATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAA 72837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203698719570564