Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1081 98.7 2e-15
seq146 89.7 1e-12
>seq1081
Length=56605
Score = 98.7 bits (108), Expect = 2e-15
Identities = 308/472 (65%), Gaps = 14/472 (3%)
Strand=Plus/Minus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
||||| |||||||||| |||| | ||| || ||||| | || ||||| |||
Sbjct 14503 TTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCCTTC 14444
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
| |||| || ||||| ||| || | ||| ||||||| | || ||||||
Sbjct 14443 GCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAG 14384
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCT 230351
||||| || || ||||||||||| || | | |||| | || | | || | ||
Sbjct 14383 CTCATCTCCCGTGATGAGGGTCTCCA-CACCGACTTCGCCTGCCTCCTCTTCTCCCACCT 14325
Query 230352 C-----CAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406
| | ||||| | || | | ||| || | ||||||| || || ||
Sbjct 14324 TAGACACCGCCCAAGCAAGCA-----GGCCGTCCAAGACGTCATTACCGAGGCTGTCAGC 14270
Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466
| ||| | |||||| | ||| || |||| ||| || | ||||||||||| ||
Sbjct 14269 ATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCC-AA 14211
Query 230467 CTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525
||| ||| || ||||| || ||||| |||||| | | | | | || ||| ||||
Sbjct 14210 CTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGA 14151
Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585
||| ||||| || | ||||| || | || |||||| ||| || || ||| ||
Sbjct 14150 GAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCAGGAAA 14091
Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||||||||||| ||||| ||| ||||| || | | ||||||| |||
Sbjct 14090 GACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTCATG 14039
>seq146
Length=163387
Score = 89.7 bits (98), Expect = 1e-12
Identities = 199/299 (67%), Gaps = 0/299 (0%)
Strand=Plus/Plus
Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428
|||| |||||||||| | ||||| || ||| || || |||| || || ||||||
Sbjct 133373 AGGGTGTAGTAACTCTTGGCCTCGGGCTTCTGCTTGACAAATTCGGCCAAGTTGCCCTTG 133432
Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488
|| ||||| || ||||| ||| ||| ||||| || | ||||||
Sbjct 133433 TAGCAGGCGAGCTTCTTTCCGGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGG 133492
Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548
|| ||||||||||| || || |||| | | | | || | || | | ||||| ||
Sbjct 133493 AAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGGTGTGGGTCTTGAGGTAATCC 133552
Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608
|| |||| | ||||| | ||| | || ||||| || ||||| ||||| || |
Sbjct 133553 TGCAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGAGAACA 133612
Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
| || |||| | ||| || | ||||||||||| ||||| ||||| || ||||| ||
Sbjct 133613 TCAGCCTTCATCAACATAGCTCTAGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 133671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057799685254220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |