Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq528 140 2e-28
seq790 107 1e-18
seq724 82.4 5e-11
>seq528
Length=17027
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || |||| ||| | ||| || ||||| |||||||||||||||
Sbjct 15302 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAC 15243
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| | || |||| || | ||||||||| |||||||| || ||||||||||| ||
Sbjct 15242 AGAGGGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 15183
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| || | || | | || | |||| ||| || ||
Sbjct 15182 ATGCCCTCCTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCGGACGACTCAACC 15123
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| ||||| ||||| || || ||||||||||||||
Sbjct 15122 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 15076
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| ||||| || |||| || | ||||||||| ||||||
Sbjct 15494 TCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAA 15435
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| || | | ||||||||| ||||| ||| | |
Sbjct 15434 ATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTA 15375
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||||| ||||| || || | ||| || || ||||| || ||||| || |||
Sbjct 15374 TCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACA 15315
Query 34379 AAGATCTGCAT 34389
|| ||||||||
Sbjct 15314 AAAATCTGCAT 15304
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || || |||| ||| || ||||| ||||||||||| ||||| ||| | ||
Sbjct 15743 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCC 15684
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| |||||||| || ||||||||||| || | || |||||| ||
Sbjct 15683 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 15624
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | ||| | ||| ||||| || | ||| || ||
Sbjct 15623 TGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCTAGCGTAATTGTC 15564
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| |||||||| || || || ||||| |||||
Sbjct 15563 TTTCCGGTGAGGGTCTTAACGAAGATTTGCAT 15532
Score = 96.9 bits (106), Expect = 2e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| |||||||| | || |||| ||| | || || ||||| ||||||||||||||
Sbjct 15074 CCACCGCGCAGACGAAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 15015
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||||| ||||| || || || |||||||| |||
Sbjct 15014 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 14955
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | ||||| ||| |||||
Sbjct 14954 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGACC 14895
Query 34343 TCCACCGTGATGGTTTTGCCGGT 34365
|| | |||||||| ||||| ||
Sbjct 14894 TCAAGGGTGATGGTCTTGCCAGT 14872
>seq790
Length=49868
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || ||||| |||| ||| | || || ||||| |||||||| || ||
Sbjct 29742 CCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 29683
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||||||||| ||||| || || ||||||||||| |||
Sbjct 29682 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 29623
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | || | | || | ||||| ||| || ||
Sbjct 29622 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACC 29563
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || ||||| || || || ||||| ||||| |||||
Sbjct 29562 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 29516
>seq724
Length=143787
Score = 82.4 bits (90), Expect = 5e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| |||||||||||||| || || | || || | ||||||||| || || ||
Sbjct 12896 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 12837
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|| ||||||||||| || | | ||||||||| ||||| ||| | || | |
Sbjct 12836 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 12777
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|| | ||||| || ||||| || | |||||||| ||||| || | || || || |||
Sbjct 12776 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAAG 12717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323064936232640
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