Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1037 96.9 7e-15 >seq1037 Length=26954 Score = 96.9 bits (106), Expect = 7e-15 Identities = 298/455 (65%), Gaps = 7/455 (2%) Strand=Plus/Plus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 |||||||| || | || |||||||| ||| | || |||||||||||||||| |||| Sbjct 7709 TTCGCCATCTACGTTGAGCCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAG 7768 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 ||| ||||||| ||| | | || |||||| | ||||||| || ||| | | || Sbjct 7769 AACCACGGCAAGGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATTCCGGAT 7828 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCT-TTCTCCGTCCGACGC 249455 | |||||| || ||| || ||||||| ||||| || | | | || | | || Sbjct 7829 CTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACCCTCATGTGCCCCAACGAATGC 7888 Query 249456 CCCGGACCTCATCGATCTACACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATC 249515 || ||| | ||| | |||||| || ||||| ||| || ||||| Sbjct 7889 CCTGGA-TTGGCAGATGTTTACGGCGATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAA 7947 Query 249516 CAACGGCATCG---GCAAGACAATCAAGGCTCGGACCCTTTTTGCGAAGGTGGTGGAGTC 249572 | || | | ||||||| |||||||| | || |||| | | ||||| Sbjct 7948 GGAGGGTAAGGGTCGCAAGACTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTC 8007 Query 249573 CCAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTA 249631 |||| |||||| || || | | || |||| ||| || || |||||| |||||| | Sbjct 8008 TCAGACTGAGACA-GGAAACCCTTTCATGTTGTACAAGGATGCCTGCAACCGCAAGAGCA 8066 Query 249632 ACCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACT 249691 |||| | | || |||||||||||| || || || || ||||| | | | |||| Sbjct 8067 ACCAGAAGAACCTCGGTACCATCCGCAGCTCCAACCTGTGCACAGAGATTGTCGAGTACT 8126 Query 249692 CGTCCAAGGAGGAGATTGCCGTCTGCAACCTGGCA 249726 | || || ||| ||||||| || ||| ||||| Sbjct 8127 CTGCCCCAGATGAGGTTGCCGTGTGTAACTTGGCA 8161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073741718808192