Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1037 257 1e-63 seq1081 174 1e-38 seq528 120 3e-22 seq790 104 2e-17 >seq1037 Length=26954 Score = 257 bits (284), Expect = 1e-63 Identities = 568/848 (67%), Gaps = 3/848 (0%) Strand=Plus/Minus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| || || ||||| ||||| ||| || | |||||| ||||| || || || || | Sbjct 8158 CAAG-TTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGT 8100 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 || | || || || | || |||||||||| || || ||||| | |||||||| Sbjct 8099 TGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGT 8040 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 | | |||| | || | || ||||| ||| ||||||| || | ||| | ||| Sbjct 8039 ACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCT 7980 Query 23211 GAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCA 23269 | || | | | ||| || ||| || || | |||||| | ||| | ||| || Sbjct 7979 GGGCCTTGATA-GTCTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCG 7921 Query 23270 AATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC 23329 || || | |||||| || |||| || || ||| | || |||||||| |||| Sbjct 7920 AACTCATCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTCCAG 7861 Query 23330 ATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGT 23389 || || || || || |||| || |||||||| ||||| ||||||||||||| Sbjct 7860 TCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAACAAG 7801 Query 23390 TCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACG 23449 || ||||| || || ||||| |||||| ||||||| |||| |||| || || || || Sbjct 7800 TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACA 7741 Query 23450 TCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGA 23509 ||||| ||||| ||||| | ||| | ||| || || || || | ||| ||||| || || Sbjct 7740 TCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTGG 7681 Query 23510 TCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCG 23569 || ||||| | || ||||||||| |||| | ||||| || || | ||||| || Sbjct 7680 TCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAGTTT 7621 Query 23570 CCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATG 23629 ||| || || | | ||| | || || | ||| | | || || || Sbjct 7620 CCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCGATA 7561 Query 23630 CCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATG 23689 ||||| | | || || ||||| || || || || ||||| ||||| ||||| ||| Sbjct 7560 CCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAATG 7501 Query 23690 CTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCC 23749 || ||||| || | |||||||||| || || |||| || || | || ||| | || Sbjct 7500 CTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACCAGCA 7441 Query 23750 GAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCG 23809 ||| ||||| ||| ||||| || |||||| ||||| || ||||| || ||| Sbjct 7440 TTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCG 7381 Query 23810 ATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGA 23869 || | ||||| ||||| ||||| || || | || || ||||| ||||||| || Sbjct 7380 ATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCATGTGCTGT 7321 Query 23870 GGTCTCTC 23877 || ||||| Sbjct 7320 GGCCTCTC 7313 Score = 122 bits (134), Expect = 8e-23 Identities = 347/531 (65%), Gaps = 7/531 (1%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 ||||||| || || ||||| || ||||| || || | |||||| || ||| || || | Sbjct 9047 TGGTGCGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGG 8988 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || |||| | ||||| | |||| ||||| ||||||| Sbjct 8987 ATGTGATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGA 8928 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | || || || || ||||||||||| | | | || ||| || || ||||| |||| Sbjct 8927 TGAAGGCACCGCGGTCGGCGGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGG 8868 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 ||||||| || | |||| || || || ||| |||||| ||| ||| | Sbjct 8867 TCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGCCGT 8808 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442 ||||| || || || | ||| ||| | ||| ||| || | || |||| Sbjct 8807 CTGCAATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACGAGGTCCTTGA 8748 Query 22443 CCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGG 22502 || |||| || ||||| |||||||||| || ||| ||||| ||| ||||| | Sbjct 8747 GCAACCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTCG 8688 Query 22503 ATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCA 22562 | ||| | || ||||| | || ||| || || ||||| | ||| || || || |||| Sbjct 8687 AGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCA 8628 Query 22563 TCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCAT 22620 | || || | || || ||||| | | ||||||| |||| | || ||| | Sbjct 8627 TGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGT 8568 Query 22621 CGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTG 22671 | |||||||||||| |||| || || || | ||||||| |||||||| Sbjct 8567 C--CCAGTCCCACAGGTCGGTAGGAGTAAC---GCCCCACATGTCGTATTG 8522 >seq1081 Length=56605 Score = 174 bits (192), Expect = 1e-38 Identities = 546/837 (65%), Gaps = 23/837 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| |||||||| || ||||| | || || | || || Sbjct 14899 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 14840 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || |||| || |||| | | || || Sbjct 14839 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGCTACTTCATCTCC 14780 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| |||||||| ||||| |||||||| | |||| | Sbjct 14779 CACGTTCTCGCTTTCTTCGCCGCGTCCGATGGAATTGTCAACGAGAACCTCCTCGAGCGC 14720 Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 || || || | || || | | || || | ||||| ||||| || ||| | | Sbjct 14719 TT--CAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGA 14662 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || | || | || || || |||||||| || ||| | ||||| | | Sbjct 14661 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 14602 Query 57865 A-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | | || || || ||||| || ||||| || || || ||| |||||||| Sbjct 14601 CTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGTATCAAGAAGAAGGCC 14543 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980 || ||| || | | ||||| || | | || | || || || || | || | Sbjct 14542 GACTGGGCAGTTAGGTGGATCCAA---GATAAGGATTCTACCTTTGCTCAGCGTCTCGTT 14486 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||| || ||||| ||||| ||||| || ||| ||| || | || || ||| | Sbjct 14485 GCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTC 14426 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||| ||| | |||||||| || |||||| | || || || || ||| Sbjct 14425 AAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAG 14366 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG---ACG 58157 |||||||| || || || || ||||| | | ||| ||| || | | |||| | | Sbjct 14365 GGTCTCCACACCGACTTCGCCTGCCTCCTCTTCTCCCACCTT----AGACACCGCCCAAG 14310 Query 58158 C-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | | | | || ||| | || |||||||| ||| ||||| | ||||| | || Sbjct 14309 CAAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCTTGAC 14250 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 || || || || || ||||||| |||||| | |||||| | |||||||| Sbjct 14249 TGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 14190 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAA 58336 ||| || |||||||| || ||||| || | ||| | ||||| ||| || Sbjct 14189 GTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAA 14130 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || || || || ||| | ||||| || | || ||||| ||||| ||||| || Sbjct 14129 CCCATTCGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAA 14073 >seq528 Length=17027 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || ||||| | || ||||| ||||| Sbjct 15076 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 15135 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| || || ||||||||| ||| | || || |||||| Sbjct 15136 GACACCATCGACAATGTGAAATCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 15195 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| | || ||| | || || ||| || ||| Sbjct 15196 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCCCTCTGTCCGACTACAAC 15255 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||||||||||| |||| ||| | || | || |||| Sbjct 15256 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGCGGTGGTA 15304 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||||| || ||||| ||||| || | || || ||| | ||| Sbjct 15304 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCC 15363 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| || || ||||||||| || | || || |||||| Sbjct 15364 GATACCATTGATAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 15423 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| | || ||| | || || || || ||| Sbjct 15424 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGACTACAAC 15483 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || ||||| || ||| |||| || Sbjct 15484 ATTCAGAAGGAGTCGACCCTGCATTTGGTTCT 15515 >seq790 Length=49868 Score = 104 bits (114), Expect = 2e-17 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || |||| Sbjct 29515 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 29574 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 29575 CGATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCA 29634 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || || || | ||||| || Sbjct 29635 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAA 29694 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 ||| || || || || || ||||| |||| || ||||| | || ||| ||||||| Sbjct 29695 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGAGACTTCGTGGAGGTGCCAAGAAGCG 29754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445756403688480