Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1037 116 7e-21
seq1081 89.7 1e-12
>seq1037
Length=26954
Score = 116 bits (128), Expect = 7e-21
Identities = 181/256 (71%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| |||||||||||||| ||||| || || ||| || || ||||| ||||||
Sbjct 7566 CCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCC 7507
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904
||||||||||| || | | | | | | |||||| || || || |||| |||| |||
Sbjct 7506 TCAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTG-GTGT 7448
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| |||||||| || || || || | |||||||| | ||
Sbjct 7447 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 7388
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| || || | || || ||||||||||| || || ||||||||||||||
Sbjct 7387 TGTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCAT 7328
Query 95025 GTCCTGAGGGCGCTCA 95040
|| ||| || | ||||
Sbjct 7327 GTGCTGTGGCCTCTCA 7312
>seq1081
Length=56605
Score = 89.7 bits (98), Expect = 1e-12
Identities = 156/227 (69%), Gaps = 9/227 (4%)
Strand=Plus/Minus
Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATT------TG 101905
||||||||||||| | ||||| ||| ||||| ||| |||| |||| |
Sbjct 14557 ATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAG---ATAAGGATTCTACCTTT 14501
Query 101906 GCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCA 101965
|| | | | |||||||| ||||| || || || |||||||| || | |||||
Sbjct 14500 GCTCAGCGTCTCGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCC 14441
Query 101966 TCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTC 102025
|||||||||||| ||||||| | || | || |||| || |||| ||| || ||| ||
Sbjct 14440 TCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTC 14381
Query 102026 ATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
|| || | || || ||||| || |||||| || ||| | || ||
Sbjct 14380 ATCTCCCGTGATGAGGGTCTCCACACCGACTTCGCCTGCCTCCTCTT 14334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989561253793270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |