Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1081 178 2e-39
seq1037 158 2e-33
seq1761 91.5 2e-13
>seq1081
Length=56605
Score = 178 bits (196), Expect = 2e-39
Identities = 375/558 (67%), Gaps = 6/558 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| | || || || ||||| | || ||| | |||||
Sbjct 14899 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 14840
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | || | | ||| |||||| | || || ||
Sbjct 14839 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGCTACTTCATCTCC 14780
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | || ||||| |||| ||||||||||| |||||||| || || | ||
Sbjct 14779 CACGTTCTCGCTTTCTTCGCCGCGTCCGATGGAATTGTCAACGAGAACCTCCTCGAGCGC 14720
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| ||| | || ||||| | ||||| ||||| ||||||||||||||
Sbjct 14719 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 14660
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315
|||||| | ||| | || | ||||| || || |||| ||||| || | |
Sbjct 14659 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCT 14600
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
||||| | | || ||||| || || ||||| || | || | ||| || |||||
Sbjct 14599 CAACGCACATAC---CTCTTCAATGCCATCGAGACCATTCCTTGTATCAAGAAGAAGGCC 14543
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| || |||||||| | || | | ||| | | || | | || || ||
Sbjct 14542 GACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCTCGTTGCC 14483
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| || || ||||| |||||||| || || || || |||| || |||||||||
Sbjct 14482 TTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCAAG 14423
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||| | || ||||| | |||||| | || || || || |||||
Sbjct 14422 AAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAGGGT 14363
Query 125556 CTACACTGTGACTTTGCC 125573
|| ||| ||||| |||
Sbjct 14362 CTCCACACCGACTTCGCC 14345
>seq1037
Length=26954
Score = 158 bits (174), Expect = 2e-33
Identities = 347/515 (67%), Gaps = 4/515 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| ||||| ||| | | ||| | || || |||||| | ||| ||| | || |
Sbjct 7613 ACCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGG 7672
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|||||| || || ||||| || || || || ||| | ||| ||||| | || || |||
Sbjct 7673 TACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGG 7732
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
|||||||| || ||||| || | || || | || ||| ||| || || | ||
Sbjct 7733 CACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGT 7792
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
||| | |||||||| || || |||||| | || ||| | ||||||||||| ||| | |
Sbjct 7793 GCCCGTGACTTGTTCTACGCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAG 7852
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
||| |||||| ||| ||||||||| || | || || || | ||| | |||
Sbjct 7853 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGC 7912
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGACGAGT 97165
|| ||||| ||||| ||| || ||||||| | ||||| | || |||| | |
Sbjct 7913 GATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACTA-T 7971
Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| | || | |||| || ||| | |||| | | ||||| ||||| |||| || |
Sbjct 7972 CAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTT 8030
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
||| | ||||||||| || || ||||| |||||||| || | || ||||||
Sbjct 8031 TCATGTTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCC 8090
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319
||||||| |||||||| || ||||| ||||||
Sbjct 8091 GCAGCTCCAACCTGTGCACAGAGATTGTCGAGTAC 8125
>seq1761
Length=22641
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123
||||| ||||| || || || ||||||||||||||| |||||| || ||||||| ||
Sbjct 7490 GAGGGTGATCTCGGCCCTGTCTACGGATTCCAGTGGCGGCACTTTGGGGCCAAGTACGTG 7549
Query 70124 GACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCA 70161
||| | |||| ||||| |||| ||||||||||||||
Sbjct 7550 GACGCCCAGACGGACTACACGGGACAGGGTGTTGATCA 7587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741042581747440
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