Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1312 100 4e-17
seq564 98.7 2e-16
>seq1312
Length=7859
Score = 100 bits (110), Expect = 4e-17
Identities = 83/99 (84%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| |||||
Sbjct 3605 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCTAT 3663
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
| | ||||| || ||||||||||| ||||||||| ||||
Sbjct 3664 CAGACGTCTTGCGCGTCGTGGTGGTGTCAAGCGTATCTC 3702
>seq564
Length=34704
Score = 98.7 bits (108), Expect = 2e-16
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| | |||| ||||||| || || |||| ||| |
Sbjct 2069 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACG 2010
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||| ||| | || ||||||| |
Sbjct 2009 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACTTCCCTCGACGTCGTCTACG 1950
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || ||||||||||| | | || ||||| || |||||
Sbjct 1949 CCCTCAAGCGTCAAGGCCGCACCCTGTACGGTTTCGGTGGTTAA 1906
Score = 91.5 bits (100), Expect = 2e-14
Identities = 78/94 (83%), Gaps = 2/94 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 2226 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 2168
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525
||| ||||| || |||||||| || |||||||||
Sbjct 2167 CCGCCGTCTCGCACGTCGTGGAGGTGTCAAGCGT 2134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073559733242
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |