Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq528 140 3e-28 seq790 131 2e-25 seq724 105 6e-18 seq1037 104 2e-17 >seq528 Length=17027 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | |||||||||||| ||||||||||| || | Sbjct 15530 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 15471 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| | || | ||||||||||||||||| Sbjct 15470 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 15411 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||||| | || | ||||||| || || | Sbjct 15410 ATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACC 15351 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || ||||| || || ||||||||||| Sbjct 15350 TCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 15304 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || || || | |||||||||||| || |||||||| ||| Sbjct 15074 CCACCGCGCAGACGAAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 15015 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| || |||||||| ||| |||| | ||| ||||||||||| || Sbjct 15014 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 14955 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | || | ||||||| ||||||| Sbjct 14954 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGACC 14895 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || || || Sbjct 14894 TCAAGGGTGATGGTCTTGCCAGT 14872 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| ||||| || || | || |||||| || ||||| || ||||| Sbjct 15987 GCCGCCGCGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTATAGTCGCT 15928 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || | | ||||| |||||||| || || |||| ||||||||||||||||| || Sbjct 15927 CAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGTGG 15868 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || || || ||||| | || | || || | ||||| | Sbjct 15867 GATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAAC 15808 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || ||||| | || || |||||||||||||| Sbjct 15807 CTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 15760 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || || || | ||||||||||| ||||||||||| ||| | Sbjct 15302 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAC 15243 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | | ||| |||||| ||||||||||| ||| | || | ||||||||||||||||| Sbjct 15242 AGAGGGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 15183 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| || | | || | || |||| ||||| | Sbjct 15182 ATGCCCTCCTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCGGACGACTCAACC 15123 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || || || |||||||| Sbjct 15122 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 15076 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||||| || |||||||| || |||||||| || | Sbjct 15758 CCACCCCGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAC 15699 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| | || | |||||||||||||| ||| Sbjct 15698 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 15639 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | ||||| | ||||||| Sbjct 15638 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACT 15579 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || ||||| || || || ||||| || ||||| Sbjct 15578 TCTAGCGTAATTGTCTTTCCGGTGAGGGTCTTAACGAAGATTTGCAT 15532 >seq790 Length=49868 Score = 131 bits (144), Expect = 2e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 ||| || || || | ||| |||||||| || ||||||||||| | |||||| || Sbjct 29728 CAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATC 29669 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| ||||||||||| ||| |||| | |||||||||||||| |||||||| || ||||| Sbjct 29668 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTC 29609 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| || ||||| | || | |||||||| ||||| | || | ||| | || Sbjct 29608 CTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGT 29549 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || || || || || || ||||| || ||||||||| Sbjct 29548 CTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 29512 >seq724 Length=143787 Score = 105 bits (116), Expect = 6e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||||| ||||| ||||||||||| || ||| Sbjct 12898 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 12839 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||||| ||||| || ||||| ||| ||| ||||| | | Sbjct 12838 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 12779 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | |||||||| |||||||| || | ||| | ||| || || || | || || |||| Sbjct 12778 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 12719 Query 131225 A 131225 | Sbjct 12718 A 12718 >seq1037 Length=26954 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||| || ||||||||||||| ||||| ||| | || | ||| || ||| | || Sbjct 8736 TTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTATGGC 8677 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||| ||||| || | ||| | || ||||||||| || || Sbjct 8676 TCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCGACG 8617 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||||||| |||||| | |||| || | |||| ||||| Sbjct 8616 AGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCAC 8557 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTG 145272 || || || | ||| ||||||||||||| || Sbjct 8556 AGGTCGGTAGGAGTAACGCCCCACATGTCGTATTG 8522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472002215112960