Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq528 104 2e-17 >seq528 Length=17027 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || ||||||||||||| || | ||||| Sbjct 15287 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGGGCGACCGTCC 15228 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || |||||||| |||| || ||||| |||||| ||| | |||||| ||||| Sbjct 15227 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 15168 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | ||||| | | | | |||||| | ||| |||| |||||||| Sbjct 15167 TGAATCTTCGATTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 15108 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| |||||||| Sbjct 15107 TTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 15076 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| || |||||||| || ||||||||||| | || ||| ||||| Sbjct 15515 AGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACCGTCC 15456 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || |||||||| |||| || ||||| |||||| ||| | ||||| ||||| Sbjct 15455 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 15396 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | ||| || | | | || ||| | ||| || | || || || Sbjct 15395 TGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTC 15336 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || ||||||||||||||||| Sbjct 15335 TTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 15304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405079143004060