Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1081 132 5e-26
>seq1081
Length=56605
Score = 132 bits (146), Expect = 5e-26
Identities = 368/564 (65%), Gaps = 3/564 (1%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| || |||||||| || | ||| || || || || || | ||| || ||| || |
Sbjct 14342 GCAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 14401
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| | | || || || ||||||||||| || || || || || || || || ||
Sbjct 14402 GCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAA 14461
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
||||| || || || || || || || | ||| | ||||| | | |||
Sbjct 14462 GATACCCTCGACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTG 14521
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
|||||| | | ||||| ||||| || ||||| |||||||| | || ||||| || ||
Sbjct 14522 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCGATGGCATT 14581
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
|| ||||| || | || || |||||||| ||||| | || || || |
Sbjct 14582 GAAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGT 14641
Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450
|| | || | ||||| || |||||||| |||||||| || | ||||| | |||
Sbjct 14642 CTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGAT 14701
Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
||| || || || | ||| | ||| || || ||||| || |||||||| || ||
Sbjct 14702 CTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCATCGGACGCGGC 14761
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCA 93567
|| ||||| | | || || || | |||||| || || | | || | |||
Sbjct 14762 GAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGGTTGTTCCA 14821
Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627
||| || || || || ||||| | || || | ||||| || |||||||| || ||
Sbjct 14822 GTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGATGCTTCCGCCTT 14881
Query 93628 TTTGTACATATCCCATATGTCTTG 93651
|||||||| | ||| || | |||
Sbjct 14882 CTTGTACATCTGCCAGATCTATTG 14905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556848312396560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |