Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1037 260 2e-64 seq1081 181 1e-40 >seq1037 Length=26954 Score = 260 bits (288), Expect = 2e-64 Identities = 1119/1745 (64%), Gaps = 59/1745 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| || |||||||| || |||||||| | | ||||| || | Sbjct 9042 CGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGGATGTG 8983 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | ||| || | |||| || ||| | |||||||||||||||||| Sbjct 8982 ATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAG 8923 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773 || || || || ||||| | | | | | | || | || ||||| || || Sbjct 8922 GCACCGCGGTCGGCGGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 8866 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||||||| ||| || || | ||||| | ||| || ||||||||||| || | Sbjct 8865 TTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGCCGTCT 8806 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT----C 113889 | ||| | | |||||| | | ||||||||||| || | ||| |||| | Sbjct 8805 GCAATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACGAGGTCCTTGAGC 8746 Query 113890 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 113949 || || | ||||| || ||||| || || ||| || | | ||||| || Sbjct 8745 AACCAGGGG----TTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTT 8690 Query 113950 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGG 114009 | ||||||||||| |||||||| ||| || | ||| |||| ||||||||| ||||| Sbjct 8689 CGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGG 8630 Query 114010 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGC 114069 ||||||||| | ||| ||| ||| |||| ||| | | | | || | ||||||| | Sbjct 8629 CATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGA 8570 Query 114070 GTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 114126 ||||||||| | || | || | || |||||| || | ||||| ||| Sbjct 8569 GTCCCAGTCCCACAGGTCGGTAGGAGTAACGCC---CCACATGTCGTATTGGAGCTCACC 8513 Query 114127 TTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---C 114183 | ||| |||| |||||||| | |||||||||| ||| | || || |||| | | Sbjct 8512 CTTGGACACTGGGGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCAC 8453 Query 114184 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 114243 |||| || | ||| |||| || || |||||||| || | | || | ||| Sbjct 8452 GGAG---GCAGTCAAGGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACTT 8396 Query 114244 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 114303 ||||||| ||||| || | || ||| | ||| |||| || ||||| ||||| Sbjct 8395 GGCCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGAC 8336 Query 114304 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATA 114360 ||| | | ||| ||| | || | | ||| | || || |||| ||||| || Sbjct 8335 ACCAACGGCAACTGGCCTGTGACGGAAATT---GCTGCGTCTGGCCTCCGGGACGGGGTA 8279 Query 114361 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 114420 | || || || | | | || | || ||| ||||||| ||||| || ||||| Sbjct 8278 GTAGTTGACGTCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAG 8219 Query 114421 CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGC 114480 ||| | | | || | ||| | | | ||||| | || ||||| | || || Sbjct 8218 CTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGCAAGGGATGC 8159 Query 114481 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT 114540 || |||||||| | |||||| ||| |||||| | ||| || || |||| || Sbjct 8158 CAAGTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGTT 8099 Query 114541 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 114600 || || ||||| || | |||||| || || ||| ||| || ||||||||||| Sbjct 8098 GGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTA 8039 Query 114601 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGG 114659 | |||| | || | || ||||| || || |||| |||||| | | ||| | | || | Sbjct 8038 CAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTG 7979 Query 114660 CGGCTGGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716 | || | | ||| ||| | | ||||||| |||||| |||||| || | Sbjct 7978 GGCCTTG-ATAGT---CTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCT 7923 Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGAC 114775 | ||||| || || | |||| | || || || || | ||||| | ||| | | Sbjct 7922 CGAACTCATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTC 7864 Query 114776 CATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAG 114835 || | || || ||| ||||||||||||||||| || || ||||||||||| |||| Sbjct 7863 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAAC 7804 Query 114836 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 114895 | || || || |||| || | || || || | ||| |||| || || | | Sbjct 7803 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 7744 Query 114896 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCA 114949 | |||||||||||| || || | ||| | |||| | || | | || ||| Sbjct 7743 ACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACC---AGGGCGCTTGTTGCCA 7687 Query 114950 GCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCA 115009 | |||| || ||||| || ||| || || ||||| ||||| || | || || | Sbjct 7686 CCTTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTC 7627 Query 115010 GATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATA 115069 || | || || || || ||| | | |||| | || | ||||| | || Sbjct 7626 GAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAAT 7567 Query 115070 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCG 115129 || ||||| || || ||||||||| || || | |||| || | ||||| || Sbjct 7566 CCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCC 7507 Query 115130 TCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGT 115188 || || || |||| | ||| | ||||||| ||||| || ||||| |||||| Sbjct 7506 TCAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTG-GGCCTGTGGTGT 7448 Query 115189 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTTATCG 115246 |||||| |||||||| ||||| | ||||| |||| || |||| ||||| | | Sbjct 7447 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTG 7390 Query 115247 TAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAA 115305 || ||||| | | | | ||| || || |||||||| || | || || ||||||| Sbjct 7389 TATGTCTCGATTGTCTTC-TCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAAT 7331 Query 115306 CATGT 115310 ||||| Sbjct 7330 CATGT 7326 >seq1081 Length=56605 Score = 181 bits (200), Expect = 1e-40 Identities = 349/509 (69%), Gaps = 7/509 (1%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 |||||||||||| |||||||||||||| || ||||||||| ||| || | |||||| || Sbjct 14357 GTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 14416 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | ||||||||| | || || || ||||||||||| ||||| ||| Sbjct 14417 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACAGC 14476 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 ||||| |||| |||||||| |||||||| ||| | | |||| | | || Sbjct 14477 AGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTGGATCCACCTAACTGC 14536 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 126297 ||| | ||||| |||| |||||| || | ||||| ||| || | ||||| | | Sbjct 14537 CCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCG 14596 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 126357 || | | || |||||||| | || ||||| || ||||| ||| |||| | | Sbjct 14597 TTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 14656 Query 126358 TTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGG 126416 || || ||| || || ||||||| |||| ||||| ||||| ||||| | | Sbjct 14657 CTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-GCTG 14714 Query 126417 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGG 126475 | || | | || ||||| ||||||||||||||| | || || || || || Sbjct 14715 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCATCGGACGCGGCGAAGAAAGCGAGA 14774 Query 126476 ATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCC 126532 | | ||||| | | |||| || || | || | |||||||||| ||| ||| Sbjct 14775 ACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCC 14834 Query 126533 TTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 || |||||||| | |||||| || ||||| Sbjct 14835 TTGGAGAGATCAATCTCCTCTGCTGTCCA 14863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340204345520