Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq790 105 7e-18
seq528 104 2e-17
seq724 98.7 1e-15
>seq790
Length=49868
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| || || | |||| || || || || || ||||||||||| |
Sbjct 29743 ACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 29684
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || || |||||||||||||| | || || ||||||||||| || ||
Sbjct 29683 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 29624
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||| || || || || || || ||| ||| || | ||||| | |||||
Sbjct 29623 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCAC 29564
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| |||| || || ||||| ||||||||
Sbjct 29563 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 29516
>seq528
Length=17027
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || ||||||||||| || | | |||||| |||| || |||||||||||
Sbjct 15500 GTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCC 15441
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| |||| || ||||||||||| |||||||| || || || || || || || |||
Sbjct 15440 GCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTG 15381
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | ||||| | ||||| || | || | |||||||| || | |||
Sbjct 15380 ACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTC 15321
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 15320 TTGACAAAAATCTGCAT 15304
Score = 102 bits (112), Expect = 8e-17
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||| || || || || |||||||| || | | |||||| | ||
Sbjct 15743 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCC 15684
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || |||| || ||||||||||| || || || || || || |||
Sbjct 15683 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 15624
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409
|| || || ||| || || | |||| ||| || || ||||||| || | |
Sbjct 15623 TGGATCTTAGACTTGACGTTATCGATGGTAT--CCGACGACTCGACTTCTAGCGTAATTG 15566
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| ||||| | || || ||||| ||||||||
Sbjct 15565 TCTTTCCGGTGAGGGTCTTAACGAAGATTTGCAT 15532
Score = 98.7 bits (108), Expect = 1e-15
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | ||| || | || | ||||| || || || |||||||| || |
Sbjct 15075 ACCACCGCGCAGACGAAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 15016
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| |||| ||||| ||||||||||| | || || || |||||||| || ||
Sbjct 15015 GAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGG 14956
Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359
|||||| || || ||||| || ||
Sbjct 14955 AATTCCCTCCTTGTCTTGGATCTT 14932
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | ||| || | |||| ||||| || || ||||||||||| || |
Sbjct 15303 ACCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGA 15244
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| | ||| |||| || ||||||||||| || |||| || ||||||||||| |||||
Sbjct 15243 CAGAGGGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGG 15184
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || || ||| || | || || | || ||
Sbjct 15183 AATGCCCTCCTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCGGACGACTCAAC 15124
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | ||||||||| || | || || || || || |||||
Sbjct 15123 CTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 15076
>seq724
Length=143787
Score = 98.7 bits (108), Expect = 1e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
|| || |||||||| || | | ||||| | || || ||||||||||| ||| | ||
Sbjct 12896 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 12837
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375
|| ||||||||||| ||||||||||| || || ||||| || || ||| ||| ||
Sbjct 12836 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 12777
Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
| ||||| || || || || | || | ||||||||| ||||| || || |||||
Sbjct 12776 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 12718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499633595465360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |