Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1037 340 2e-88 >seq1037 Length=26954 Score = 340 bits (376), Expect = 2e-88 Identities = 1010/1532 (66%), Gaps = 42/1532 (3%) Strand=Plus/Plus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-G 93954 |||| || || ||||| || || || || | | ||| |||| || || ||| || | | Sbjct 7425 CCCCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCG 7484 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | |||| || ||| || || | |||| |||||| ||||| | ||| Sbjct 7485 AC-ATGAAGGAGGATAGCATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATC 7543 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCT 94072 ||||| || || || ||||| | | | ||||| |||| ||||||| ||| | | Sbjct 7544 TCAAAGACTGCTGGAGGTATCGGATTGAATATCCAC--CGTATCCGTGCCACTGGTGCAT 7601 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| ||||||||| || | ||| |||||| | |||||||||||||| || ||||||| Sbjct 7602 ACATTGCCGGTACCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACA 7661 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || | ||||| ||||| ||||| | | | ||| ||||||| |||| Sbjct 7662 ACACCGCAAGGTACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACG 7721 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| ||||||||||| || | ||| | ||| || |||||||||||||||| | Sbjct 7722 TTGAGCCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGCAAGG 7781 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | ||| | ||| | ||||||||||||||| | || || || || ||||| | Sbjct 7782 AGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATTCCGGATCTCTTCATGAAGC 7841 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | |||||||| ||| || ||||| || | || ||||| ||||| || ||| || | | Sbjct 7842 GTGTCGAGAAGAACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAG 7901 Query 94373 ACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 | |||| | ||| | | || || | | || | | ||||| | |||| |||| Sbjct 7902 ATGTTTACGGCGAT-GAG-TTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGG 7959 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | ||| ||| | || |||||| ||| | || | || ||| ||||| Sbjct 7960 TCGCAAGACTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGAC 8019 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | || | ||| |||| |||||| | |||| |||| ||||||| || |||| Sbjct 8020 AGGAAACCCTTTCATGTTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCT 8079 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 ||| ||| ||||| || |||||||| |||||||||||||| || | || || || Sbjct 8080 CGGTACCATCCGCAGCTCCAACCTGTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGA 8139 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670 | |||| ||||||||| ||| ||| | |||| | || | || || ||| | | || Sbjct 8140 GGTTGCCGTGTGTAACTTGGCATCCCTTGCCCTGCCGACATATGT-TGACATGGCCA-AC 8197 Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTTG 94728 | | | | ||| | || ||||| | || | ||| || ||| | Sbjct 8198 GGC-------ACATACGACTTCCAGAAGCTTCACGAGGTCAC--ACAGGTTGTTGTCAAG 8248 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA--A 94786 ||| |||||| | | || ||| |||| |||||||||||||||||| || || || | Sbjct 8249 AACTTGAACAAGATCATTGACGTCAACTACTACCCCGTCCCGGAGGC-CAG-ACGCAGCA 8306 Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846 | | || |||| | | | | || ||||||||| | || || || | || Sbjct 8307 ATTTCCGTCACAGGCCAGTTGCCGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTC 8366 Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTT--TGAATTTGAACATATTCGAAAG 94904 | || || |||| ||| ||| ||| || | ||| | || | | || || || | Sbjct 8367 TCCGCCTTCCCTTCGATTCTCCCGAGGC--CAAGTTCCTCAACTCCCAGATCTTTGAGAC 8424 Query 94905 CATTTATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCGGGCCAC 94963 ||| || |||| ||| ||| ||||| | || | |||||| ||||| || Sbjct 8425 CATCTACCACGGTGCCTTGACTGCCTCCGTGGAGCTGGCCCAGAT-TCACGGC---ACAT 8480 Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 |||| | | | ||||| || || |||| | || | |||| | ||||| | Sbjct 8481 ACGAGACCTACGAGGGATCCCCAGTGTCCAAGGGTGAGCTCCAATACGACATGTGGGGCG 8540 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGG 95081 | | || | | |||| |||||||| |||| | || | || | | | ||||| Sbjct 8541 TTACTCCTACCGACCTGTGGGACTGGGACTCTCTCAAGGCCCAGA--TCAAGCAGCACGG 8598 Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141 ||| ||| | ||||| || || ||||||||||| |||||||| | |||||||| || Sbjct 8599 TGTCCGCAACTCCCTGCTCGTCGCACCCATGCCCACTGCCTCCACCTCCCAGATCCTCGG 8658 Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201 | |||||||| ||||| || | |||||| ||| | ||| | || || || ||||| Sbjct 8659 CTTCAACGAGTGCTTCGAGCCATACACCTCGAACATCTACTCGCGCCGTGTCCTGGCCGG 8718 Query 95202 GGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGG 95260 || |||| ||| ||||| | || |||||| | || | ||||| | ||| Sbjct 8719 CGAGTTCCAAGTCGTCAACCCCTGGTTGCTCAAGGACCTCGTCGAC-ATGGGTCTCTGGT 8777 Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320 ||||| | ||||||| | | | | ||||||| ||||||||||||| | | Sbjct 8778 CCGACAACATGAAGAACCGCATCATTGCAGACGGCGGCTCCATCCAGAACATCCCCAACA 8837 Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATAC 95380 | || | ||||||||||| |||||||||||||| ||||||||| | |||||| || Sbjct 8838 TCCCCGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGCACCATCG 8897 Query 95381 TCGACCACGCGGCCGCCCGCGGGCCCTTCATC 95412 || | || |||| |||||| |||||||| Sbjct 8898 TCCAGATGGCCGCCGACCGCGGTGCCTTCATC 8929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494712105832240