Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq207 89.7 4e-13 >seq207 Length=97996 Score = 89.7 bits (98), Expect = 4e-13 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 118148 GCCGTAAAAGGCGATA-CACTCCGACAGTTTTCCGTCGCGACCGGCCCTTCCTATCTCTT 118206 ||||||||| |||| ||| | || ||||||||||| | ||| || | || | || | Sbjct 87407 GCCGTAAAATA-GATAACACCCGGAGAGTTTTCCGTCCCTACCAGCGCGGCCAGTTTCCT 87349 Query 118207 GATAATAACCGTCCAGTGATTTGGGCATACTGTGATGTATCACCAACCGCACGTCGGGTT 118266 |||||||||| ||||| ||| || || | || ||||| || ||||| |||| || || Sbjct 87348 GATAATAACCCTCCAGGCTTTTCGGGATTGTATGGTGTATTACAAACCGAACGTTGGCTT 87289 Query 118267 TATCGATGCCCATCCCGAACGCTATCGT 118294 | ||||| ||||| || ||||| || || Sbjct 87288 TGTCGATTCCCATACCAAACGCAATAGT 87261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381764452776336