Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq528 102 7e-17 >seq528 Length=17027 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || ||||| || | | ||| | || ||||| ||||| ||||| ||||| ||||| Sbjct 15986 CCGCCGCGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTATAGTCGCTC 15927 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | ||| || | || || || || | ||||| || ||||||||||| || Sbjct 15926 AGCGTCCTCCCATCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGTGGG 15867 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || || ||||| ||||| || |||| || | || | |||||| |||||||| || Sbjct 15866 ATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGACTCAAC 15808 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||||| || || ||||| | || || || ||||| ||||| Sbjct 15807 CTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 15760 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| ||||| || ||||| ||||| || || || Sbjct 15761 ATACCACCCCGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCA 15702 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | |||| || ||||||||||| Sbjct 15701 GACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 15642 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || |||||||| || || |||| || | || | ||| || || ||||| Sbjct 15641 GGGATGCCCTCCTTATCTTGGATCTTAGACTTGA-CGTTATCGATGGTATCCGACGACTC 15583 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || |||| || || ||||| || || || || || |||||||| Sbjct 15582 GACTTCTAGCGTAATTGTCTTTCCGGTGAGGGTCTTAACGAAGATTTGCAT 15532 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 |||||| || || ||||| || || || || || | ||| | || || | || Sbjct 15507 ATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACCGTCCTCGAGCTG 15448 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || ||| | |||| || ||||||||||| ||||| || || || || ||||| || Sbjct 15447 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTT 15388 Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 |||| || | || | ||| ||||| || || || || || |||| ||| ||||| | Sbjct 15387 CGACTTGA-CGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTGCCCG 15329 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || |||||||| ||||| Sbjct 15328 TAAGAGTCTTGACAAAAATCTGCAT 15304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451993063828240