Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1037 259 6e-64 seq1081 174 2e-38 >seq1037 Length=26954 Score = 259 bits (286), Expect = 6e-64 Identities = 1064/1655 (64%), Gaps = 51/1655 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| || |||||||| | | ||||| || | Sbjct 9042 CGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGGATGTG 8983 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | ||| || | |||| || ||| | |||||||||||||||||| Sbjct 8982 ATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAG 8923 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734 || || || || ||||| | | | | | | || | || ||||| || || Sbjct 8922 GCACCGCGGTCGGCGGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 8866 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACC---T 115791 |||||||| ||| || || | ||||| | ||| || ||||| ||||| || | Sbjct 8865 TTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGCCGTCT 8806 Query 115792 GCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCT-- 115849 || ||| || | | |||||| | | ||||||||||| || | ||| |||| Sbjct 8805 GCAATGA---TGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACGAGGTCCTTG 8749 Query 115850 --CCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGAT 115907 | || ||| | ||||| || ||||| || || ||| || | | ||||| Sbjct 8748 AGCAACCAGGGG----TTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGAT 8693 Query 115908 GTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGT 115967 ||| | ||||||||||| |||||||| ||| || | ||| |||| |||||||| || Sbjct 8692 GTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGT 8633 Query 115968 GGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAG 116027 |||||||||||| | ||| ||| |||||||| ||| | | | || | ||||||| Sbjct 8632 GGGCATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAG 8573 Query 116028 GGCGTCCCAGTCGTAGTTG-AGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATAC 116086 | ||||||||| | | | | | | | | ||||||| || | ||||| || Sbjct 8572 AGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATGTCGTATTGGAGCTCAC 8514 Query 116087 CTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT--- 116143 | | |||| |||| |||||||| | ||||| |||| ||| | || || |||| | Sbjct 8513 CCTTGGACACTGGGGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCA 8454 Query 116144 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 116203 ||||| || | ||| |||| || || |||||||| || | | || | || Sbjct 8453 CGGAG---GCAGTCAAGGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACT 8397 Query 116204 TGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGA 116263 |||||||| ||||| || | || ||| | ||| |||| || ||||| |||| Sbjct 8396 TGGCCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGA 8337 Query 116264 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGAT 116320 |||| | | ||| ||| | || | | ||| | || || |||| ||||| | Sbjct 8336 CACCAACGGCAACTGGCCTGTGACGGAAATT---GCTGCGTCTGGCCTCCGGGACGGGGT 8280 Query 116321 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 116380 | | || || || | | | || | || ||| ||||||| ||||| || |||| Sbjct 8279 AGTAGTTGACGTCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAA 8220 Query 116381 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACG 116440 |||| | | | || | ||| | | | ||||| | || ||||| | || | Sbjct 8219 GCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGCAAGGGATG 8160 Query 116441 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT 116500 ||| |||||||| | |||||| ||| |||||| | ||| || || |||| | Sbjct 8159 CCAAGTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGT 8100 Query 116501 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 116560 | || || ||||| || | |||||| || || ||| ||| || |||||||||| Sbjct 8099 TGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGT 8040 Query 116561 AGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCG 116619 | | ||| | || | || ||||| || || |||| |||||| | | ||| | | || Sbjct 8039 ACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCT 7980 Query 116620 GCGGCTGGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCC 116676 | | || | | ||| ||| | | ||||||| |||||| |||||| ||| Sbjct 7979 GGGCCTTG-ATAGT---CTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCC 7924 Query 116677 TCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGA 116735 || ||||| || || | | |||| | || || || || | || || | ||| | Sbjct 7923 TCGAACTCATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGT 7865 Query 116736 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 116795 ||| | || || ||| || |||||||||||||| || || |||||||| || |||| Sbjct 7864 CCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAA 7805 Query 116796 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 116855 | || || || |||| || | || || || | ||| |||| || || | Sbjct 7804 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAA 7745 Query 116856 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGC 116912 || |||||||||||| || || | ||| | |||| | || ||| ||| | Sbjct 7744 GACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACC 7685 Query 116913 CTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGA 116972 |||| || ||||| || || ||| || ||||| ||||| || | || || | || Sbjct 7684 TTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGA 7625 Query 116973 TTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGTGCATAC 117031 | || || || || ||| | || | |||| | || | |||||| | || | Sbjct 7624 GTTTCCGTTGGTACCGGCAATGTATGCACCAG-TGGCACGGATACGGTGGATATTCAATC 7566 Query 117032 CAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCAT 117091 | ||||| || || ||||||||| || || | |||| || | ||||| || | Sbjct 7565 CGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCT 7506 Query 117092 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTA 117150 | || || |||| | ||| | ||||||| ||||| || ||||| ||||||| Sbjct 7505 CAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTG-GGCCTGTGGTGTA 7447 Query 117151 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 ||||| |||||||| ||||| | ||||| |||| Sbjct 7446 CCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA 7412 >seq1081 Length=56605 Score = 174 bits (192), Expect = 2e-38 Identities = 350/512 (68%), Gaps = 13/512 (3%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||||||||| |||||||||||||| || ||||||||| ||| || | |||||| || Sbjct 14357 GTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 14416 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | ||||||||| | || ||||| ||||||||||| ||||| ||| Sbjct 14417 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACAGC 14476 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCAT 127707 ||||| |||| ||||||| ||||||| || | |||| | |||| | | Sbjct 14477 AGCGAAGGCAACGAGACGCTGAGCAAAGG---TAGAATCCTTATCTTGGATCCACCTAAC 14533 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 127767 ||||| | ||||| |||| |||||| || | ||||| ||| || | ||||| | | Sbjct 14534 TGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCGATGGCATTGAAGAGGTATGT 14593 Query 127768 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGAC 127827 || | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 14594 GCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAAT 14653 Query 127828 CATTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 127886 | || || ||| || || ||||||| |||| ||||| ||||| ||||| Sbjct 14654 GTTCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-G 14711 Query 127887 CGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCC 127945 | || || | | || ||||| ||||||||||||||| | || || || || Sbjct 14712 CTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCATCGGACGCGGCGAAGAAAGCG 14771 Query 127946 AGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGA 128002 || | | ||||| | | |||| || || | || | |||||||||| || Sbjct 14772 AGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGG 14831 Query 128003 TCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||| |||||||| | |||||| || ||||| Sbjct 14832 TCCTTGGAGAGATCAATCTCCTCTGCTGTCCA 14863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613493442101040