Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1037 161 2e-34 >seq1037 Length=26954 Score = 161 bits (178), Expect = 2e-34 Identities = 429/638 (67%), Gaps = 18/638 (3%) Strand=Plus/Minus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || |||||||| |||||||| ||||| || ||| ||| | ||||||||| | | Sbjct 9039 AGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGGATGTGATC 8980 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 |||| || | ||||| |||||| ||||| || |||||| ||| |||||||| ||| Sbjct 8979 TTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAA-GGC 8921 Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063 || || || |||||||| | || ||||| ||| || |||||||| || |||||| | Sbjct 8920 ACCGCGGTCGGCGGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGGTCTTGTA 8861 Query 204064 CACGTCTCTGGTGT-GTTGAGGCACATCTTCCC-ACGTCCTG-ATCGAGCCGTTGTCGGC 204120 | | | || ||| | | || || || | || ||| || |||||| ||| || Sbjct 8860 GAGGGCCTTGATGTCGGCGGGG---ATGTTGGGGATGTTCTGGATGGAGCCGCCGTCTGC 8804 Query 204121 CATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAG 204180 || | | || || | | || ||| | |||| || || ||| | || Sbjct 8803 AATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACGAGGTCCTTGAGCAA 8744 Query 204181 GTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGT 204240 |||||||| || || || || |||| ||| || | || | | | | ||| ||| Sbjct 8743 CCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTCGAGGT 8684 Query 204241 GAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGG 204300 | |||| ||||| ||||||| ||||| ||||| | |||| ||| ||||||||||| Sbjct 8683 GTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATGGG 8624 Query 204301 AGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCA 204360 || | ||||||||||||||| ||||||| | | || | | ||| |||||| ||| Sbjct 8623 TGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCCCA 8564 Query 204361 GTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGAT--GCCTT-GACT 204417 ||| || | | || | ||||||||||||||| | || || | |||| ||| Sbjct 8563 GTCCCACAGGTCGGTAGGAGTAACGCCCCACATGTCGTATTG-GAGCTCACCCTTGGAC- 8506 Query 204418 GACTGGGCTGCCCTTGTACGTCGGATAAG-GCTGATCCTCTTCTGCCAGCTTGCAC-GAG 204475 |||||| |||| ||| ||| || | || | || | |||||| | ||| ||| Sbjct 8505 -ACTGGGGATCCCTCGTAGGTCTCGTATGTGCCGTGAATC-TGGGCCAGC-TCCACGGAG 8449 Query 204476 GCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513 || | || ||| | ||| ||||||||||||||||| Sbjct 8448 GCAGTCAAGGCACCGTGGTAGATGGTCTCAAAGATCTG 8411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795137368644640