Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq790 140 4e-28
seq528 140 4e-28
seq724 116 4e-21
>seq790
Length=49868
Score = 140 bits (154), Expect = 4e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || || ||||| | || ||||||||||||||||||||
Sbjct 29707 CTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 29648
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | | |||||||||| |||||| ||||| |
Sbjct 29647 GATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 29588
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || ||| ||| ||||| || | ||||| || ||||||||||| || || ||
Sbjct 29587 GTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCAC 29528
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 29527 GAAGATTTGCAT 29516
>seq528
Length=17027
Score = 140 bits (154), Expect = 4e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||||||||| |||| ||| |||| |||||||||||||| |||||
Sbjct 15267 CTCCTTCTGAATGTTGTAGTCGGACAGAGGGCGACCGTCCTCGAGCTGCTTGCCCGCGAA 15208
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | || |||||||||| |||||| || | |
Sbjct 15207 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGATTTCACATT 15148
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| ||| || || |||| |||||||| ||||| || || || || ||
Sbjct 15147 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 15088
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 15087 AAAGATCTGCAT 15076
Score = 134 bits (148), Expect = 2e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| ||||| || |||||| || || |||||||| || || ||||| |||| |||
Sbjct 15512 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACCGTCCTCG 15453
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| ||||| |||| |||||||||||| | || | | ||||||||||
Sbjct 15452 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGA 15393
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||||| | | | || ||| |||||||| || | ||| || || |||
Sbjct 15392 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTG 15333
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || || || ||||| || |||||
Sbjct 15332 CCCGTAAGAGTCTTGACAAAAATCTGCAT 15304
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | ||| |||||| ||||| |||||||| || || ||||| | || |||
Sbjct 15740 ACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTCG 15681
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| ||||| |||| |||||||||||| | || | || |||||| || |
Sbjct 15680 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGG 15621
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||||| | | | || || ||| || || || | ||| || || ||
Sbjct 15620 ATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCTAGCGTAATTGTCTTT 15561
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || ||||| |||||||||||
Sbjct 15560 CCGGTGAGGGTCTTAACGAAGATTTGCAT 15532
Score = 107 bits (118), Expect = 2e-18
Identities = 128/171 (75%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || || ||||||||||||||
Sbjct 15039 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAA 14980
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| || |||||||| | || | | ||||||||| |||||| |||| | |||
Sbjct 14979 GATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGCTCTT-AACGT 14921
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | | || ||| ||| || || || | |||||||| ||||| ||||
Sbjct 14920 TGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 14870
Score = 91.5 bits (100), Expect = 2e-13
Identities = 162/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|||| ||| || | | ||| | ||||| || | || |||||||| ||||| || |||
Sbjct 15992 TATTGGCCGCCGCGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTATAG 15933
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
||| || || | | | || ||||||||||| || || || ||||| |||||||||||
Sbjct 15932 TCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCC 15873
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539
| || | | |||||| ||| ||||| ||||| ||| | | | ||||| ||
Sbjct 15872 GGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGA 15814
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || | || ||||| || || |||| || || || || || |||||
Sbjct 15813 CTCAACCTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 15760
>seq724
Length=143787
Score = 116 bits (128), Expect = 4e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| |||||||| | || |||||||||||||| || || |
Sbjct 12898 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 12839
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | | ||||||||| ||||||| ||||| |
Sbjct 12838 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 12779
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | || ||| || || || || | |||||||| |||||||||| || || || |
Sbjct 12778 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 12719
Query 46584 AG 46585
||
Sbjct 12718 AG 12717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565225724528880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |