Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1081 250 2e-61 seq528 127 2e-24 seq790 109 5e-19 seq724 96.9 3e-15 >seq1081 Length=56605 Score = 250 bits (276), Expect = 2e-61 Identities = 579/863 (67%), Gaps = 25/863 (3%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||| || ||| | || ||||| || || || || ||||| | Sbjct 14039 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 14098 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 || ||| ||| | ||| || || || ||||||| | ||||||| ||| | | || Sbjct 14099 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACC 14158 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || || || |||||||||||||| |||||||| ||||||||| ||| | | Sbjct 14159 GA---GGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 14215 Query 132768 ATTAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | || ||||| ||||| || | | || || || | || |||||||||| || Sbjct 14216 GTTCATGCCGAGCAG-CGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGA 14274 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||||| | || || ||| | | ||| || || || | || || Sbjct 14275 CAGCCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGA 14334 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 | | | ||| || |||||| || | ||||| || | ||| ||||| ||||| || Sbjct 14335 AGAGGAGGCAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGA 14394 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | |||| ||| | ||||||||| || || |||||||| || |||| |||||| ||| | Sbjct 14395 AGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 14454 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| |||||||| || ||||| || || || |||| | || || | || | Sbjct 14455 AGAAGAAGATACCCTCGACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCT 14514 Query 133067 TG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 | || | |||||| | | ||||| |||||||| | |||| || || || || ||| Sbjct 14515 TATCTTG-GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCG 14573 Query 133126 ATGGCGTTCAACAA--ACG-GAGTTT---CTCTTCCGAGGAACGCACGTAGGTGTCGATG 133179 ||||| || || | | | | ||| || ||| | | ||| ||||||||| Sbjct 14574 ATGGCATTGAAGAGGTATGTGCGTTGAGCCTGCTCCTTG------ATGTATGTGTCGATG 14627 Query 133180 AGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCAC 133239 ||| || || | || | ||| | |||||| || |||||| || ||||| ||||| Sbjct 14628 AGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 14687 Query 133240 CGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATG 133299 || || || | ||| || || ||| ||||||| || || |||||||| || Sbjct 14688 CGGGCTTCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATT 14747 Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359 || ||| |||||||| || || || ||||| |||||| | |||||| | ||| || Sbjct 14748 CCATCGGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTG 14807 Query 133360 AAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAAC 133416 | ||| | ||||||| | ||||||||| || || | |||||| | ||||| || Sbjct 14808 AGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAA 14867 Query 133417 GACGCCTCGGCTTTTTTGTACAT 133439 || || || || || |||||||| Sbjct 14868 GATGCTTCCGCCTTCTTGTACAT 14890 >seq528 Length=17027 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| | || |||||| | |||| | | | | |||| | | || Sbjct 14872 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACCATCGACAACGTTAAGAGC 14931 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || | ||| ||||| |||||||||||| | ||||| || || || || | ||| ||||| Sbjct 14932 AAGA-TCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAA 14990 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 || || || |||| ||||||||| ||||||||||||||| ||||| |||| || || Sbjct 14991 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 15050 Query 38447 TTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| || | || || Sbjct 15051 CTTGGTCCTTCGTCTGCGCGGTGG 15074 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| |||||||| | || || ||| | || Sbjct 15076 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 15135 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | ||| || || | ||||| ||||| ||||| | ||||| Sbjct 15136 GACACCATCGACAATGTGAAATCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 15195 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||||||||| ||||| || |||| ||| | || |||||||||| Sbjct 15196 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCCCTCTGTCCGACTACAAC 15255 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| |||| || || ||||| || ||| Sbjct 15256 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGT 15291 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| || || || | || || || | || Sbjct 15304 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCC 15363 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | ||||| ||||| ||||| | ||||| Sbjct 15364 GATACCATTGATAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCA 15422 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||| ||||| || |||| |||||||| |||||||| Sbjct 15423 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGACTACAA 15482 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| |||| ||||||||||| || ||| Sbjct 15483 CATTCAGAAGGAGTCGACCCTGCATTTGGTTCTCCGT 15519 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || || || | || |||||| | | Sbjct 15532 ATGCAAATCTTCGTTAAGACCCTCACCGGAAAGACAATTACGCTAGAAGTCGAGTCGTCG 15591 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| || || ||||| || || | ||||| Sbjct 15592 GATACCATCGATAACG-TCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 15650 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||| ||||| || || | |||||||| |||||||| Sbjct 15651 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGACTACAA 15710 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | ||||| ||| | || || || Sbjct 15711 CATCCAGAAGGAGTCTACGCTACATCTTGTTCTCCG 15746 >seq790 Length=49868 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || |||||||| || |||||| | || || ||| | || Sbjct 29516 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 29575 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || || |||| ||||| |||||||| ||| | ||||| Sbjct 29576 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCAG 29635 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | |||||||| || |||||| Sbjct 29636 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 29695 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 ||||| ||||| | || || || ||||| ||| Sbjct 29696 ATCCAGAAGGAGTCCACCCTTCACTTGGTCCTG 29728 >seq724 Length=143787 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || | |||||||| ||||||||| | || |||||| || |||| | | Sbjct 12718 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 12777 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||||||||| | ||||| ||||| || Sbjct 12778 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTG 12837 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||||| || || | ||||| || ||||||||||||||| ||| Sbjct 12838 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 12897 Query 38433 G 38433 | Sbjct 12898 G 12898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500161583624960