Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1180 329 4e-85 seq1249 89.7 7e-13 seq724 86.0 8e-12 >seq1180 Length=34342 Score = 329 bits (364), Expect = 4e-85 Identities = 965/1478 (65%), Gaps = 14/1478 (1%) Strand=Plus/Plus Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 || |||| || || || ||||| | |||||| | || | ||||| || ||| | Sbjct 19668 ACGTTCATGATTCCGTTGGCATCGAGATCGAAGGTGACCTCGATTTGGGGAACACCACGG 19727 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 ||||||| ||| ||||| || | || || | || | | |||| ||| | | | Sbjct 19728 GGTGCGGGTGGGATACCGGTGAGCTCGAACTTGCCCATCAGGTTGTTGTCCTTGGTGCGC 19787 Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAG 6874 || || ||||| || |||| | || || |||| || || || || ||| Sbjct 19788 TTGCGCTCACCCTCGAAGACCTGGATCAGGACACCAGGCTGGTTGTCGGAGAAGGTGGAG 19847 Query 6875 AAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATA 6934 |||| | ||||| | ||| || || || || | || | |||||||| ||| Sbjct 19848 AAGACCTCGGACTTCTTGGTTGGGATGGTGGTGTTGCGGTTGATGAGAGGGGTCATGATA 19907 Query 6935 CCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGA 6994 ||||| ||| || | || ||||||||||| | || ||||| || | | || | Sbjct 19908 CCACCGGCAGTCTCAATACCGAGAGACAGAGGAGCGACATCCAAAAGGAGGATCTCGTTG 19967 Query 6995 ACAGA-TTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCG 7051 || |||| | |||| | | || || || || || | || || || ||| Sbjct 19968 GTGGACTTCGACGAGGTGTCACCAGAGAGAATTGCTGCCTGCACGGCAGCACCATAGGCG 20027 Query 7052 ACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAAC 7111 || |||||||| ||||| || | || || | || || ||||| || || || | | Sbjct 20028 ACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGTAGTCGGTGATG 20087 Query 7112 ATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTC 7171 | | || ||| | ||||| || || || || ||||| | ||||| || | || || Sbjct 20088 AGCTTCTGGATTCTTGGGATACGGGTGGAACCTCCGACGAGGACGATCTCGTGAACCTTG 20147 Query 7172 GATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAAC 7231 | || |||| ||| | |||| || ||||| || | | | ||||| Sbjct 20148 GTCTTGTCGAGCTTGGCGTCTGAGAGGACACGGTCGACGGGCTGGAGAGTGGAGCGGAAG 20207 Query 7232 AAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCG 7291 | ||| ||||| |||||||| || |||||||| || || || ||||| ||||| || Sbjct 20208 AGATCCTGGCACAGCTCCTCAAAGCGGGCACGGGTGATTGAGGTGTAGAAGTCAACACCC 20267 Query 7292 TCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCG 7351 ||| | | || || || || |||| || || || | || || | || ||||| || Sbjct 20268 TCGAAGAGAGAGTCGATCTCGATGGAGGTCTGGGCAGAGGACGAAAGAGTGCGCTTGGCA 20327 Query 7352 CGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTA 7411 ||||| || || || || | |||||| |||||||| | || || | || ||||| Sbjct 20328 CGCTCGCATGCTGTGCGGAGACGACGGAGGGCACGAGCATTGGAAGAGAGGTCCTTCTTG 20387 Query 7412 TGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCA 7471 || || ||||| ||||| | |||||| || ||| | |||||||| |||||| Sbjct 20388 TGCTTGCGTTTGAACTCGTTGACGAAGTGGTTAACGAGACGGTTGTCGAAATCCTCACCA 20447 Query 7472 CCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAAC 7531 |||||||| || || || || || | ||||| || |||||||| | || ||| | | Sbjct 20448 CCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCCTCCTCGATGGTGAGG 20507 Query 7532 AACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT 7591 | || ||||| || || |||||||| || || || || || ||||| || | || Sbjct 20508 AGAGAGACATCGAAAGTTCCACCACCAAGATCGAAGATCAGGACGTTGCGCTCACCCTCG 20567 Query 7592 TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 ||||| || |||||||| || || || || || || || || || || ||||| || Sbjct 20568 ACCTTCTTGTCAAGACCGTAAGCAATGGCAGCGGCTGTAGGCTCGTTGATGATACGGAGG 20627 Query 7652 CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAG 7711 ||| || || ||||| | ||||| || || || || || || || ||||| ||| Sbjct 20628 ACGTTGAGTCCGGCAATGAGACCGGCATCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAG 20687 Query 7712 TAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATA 7771 || || ||||| || || || |||| |||| | ||||| || | || || | Sbjct 20688 TAAGCTGGGACGGTGACAACAGCGTTGTTGACGGTTCCGCCGAGGTAGGCCTCAGCAGTC 20747 Query 7772 TCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCA 7831 || ||| ||| || | ||| || || ||||| || | | || | || || || Sbjct 20748 TCGCGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGTGAAGTCCTTGGTCTCG 20807 Query 7832 CCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACG 7889 || || || || || | ||| | ||| || |||| | | ||| | ||| | | Sbjct 20808 CCCTTGAACTCGACCTGGCAAAC-TGGCTT--GCCGC--CCTTGTCGATGATCTTGAAGG 20862 Query 7890 ACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCT 7949 | | ||||| ||| | ||||||| ||| | ||||| | ||||| ||||||| Sbjct 20863 GGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGGCGAACTTGCGACCGATCAGACGCT 20922 Query 7950 TTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGA 8009 | || || || || ||||| | ||||||||||| ||||||||| || || || |||| Sbjct 20923 TGGCGTCGAAGACGGTGTTGGTTGGGTTCATGGCGACTTGGTTCTTGGCGGCATCACCGA 20982 Query 8010 TAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGT 8069 | ||||| || | || || || || ||| |||| ||||| || || || || |||| Sbjct 20983 TCAGACGCTC---GGTGTCAGTGAAGGCAACGAACGAGGGGGTTGTGCGGTTGCCCTGGT 21039 Query 8070 CGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTC 8129 |||| ||||| || || | |||||| | | ||| || |||||||| || || || | Sbjct 21040 CGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATACCCACGCACGAGTAGGTGGTAC 21099 Query 8130 CTAAATCAATACCGATTGCTTGAGTCATTTTATATATT 8167 | ||||| ||||||| |||| | | || || |||||| Sbjct 21100 CCAAATCGATACCGA-TGCTGGGGCCAGTTAGTATATT 21136 >seq1249 Length=41353 Score = 89.7 bits (98), Expect = 7e-13 Identities = 134/190 (71%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| || |||||| || | |||||||| || ||||| |||| || || || | Sbjct 6195 GTGTTCTTTGGGTTCGCAGCAGCCTGGTTCTTAGCTGCGTCTCCGACCAGGCGCTCCTCC 6254 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | || || |||||||| |||||||| ||| | ||||||||||| | | ||| Sbjct 6255 T---CGGTGAATGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 6311 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || || |||| ||| || ||||| || || || || ||||| |||||||||||| Sbjct 6312 TCGACCTTTCCGTTCTGCATCACACCGACACAAGAGTAGGTGGTTCCCAAATCAATACCG 6371 Query 8144 ATTGCTTGAG 8153 || || ||| Sbjct 6372 ATAACTGGAG 6381 >seq724 Length=143787 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| || |||||||| || | ||| || || || || || || | | ||| ||| ||| Sbjct 73094 CTTCTCAAGACCGTATGCAAGAGCAGCGGCAGTAGGCTCGTTGACGACACGGAGAACGTT 73035 Query 7657 CAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 |||||||||||| ||| | ||||| || || ||||| || || || ||||| ||||| Sbjct 73034 CAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTTGGCGCTGGGAGTCGTTGAAGTAA 72977 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGA 7742 || ||||| || || || |||| | ||| Sbjct 72976 GCTGGGACAGTGACAACGGCGTTCTTGA 72949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635118557146960