Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1037 257 2e-63 seq1081 145 9e-30 >seq1037 Length=26954 Score = 257 bits (284), Expect = 2e-63 Identities = 944/1453 (65%), Gaps = 39/1453 (3%) Strand=Plus/Plus Query 111556 TCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTC-TTGATGGAAACCCCA 111614 |||||||||| ||| | |||||| | | || ||||| ||| || | | ||| Sbjct 7263 TCAAGACCCTGGAGCGATCCTACCTTCTCCGCCTTGATGGCAAGGTTGCTG-AGAGGCCA 7321 Query 111615 CAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTG 111674 ||| ||||| | ||||| || ||| | || || || || || |||||||| | Sbjct 7322 CAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGTGAGGATATTGAGAAGACAATC 7381 Query 111675 GAGACATACGACAAGATGTCC-CGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAA 111733 ||||||||| || ||||| | || |||| ||||| | ||||| |||||||| Sbjct 7382 GAGACATACAACCTCATGTCTTCCAAATAC-TTCACACACGCTTCCCCAACACTCTTCAA 7440 Query 111734 CGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTC 111793 |||||||||||| |||| |||| || ||| | | | | ||||||||| Sbjct 7441 TGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCGACATGAAGGAGGATAG 7500 Query 111794 AATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGG 111853 || | || || || | ||| |||| |||||| ||||||||| ||||| || Sbjct 7501 CATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTGGAGG 7560 Query 111854 TATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATG 111912 |||||| || | ||||| | || | |||| | || | ||| ||||| || | Sbjct 7561 TATCGGATTGAATATCCACCGTATCCGTGCCA-CTGGTGCATACATTGCCGGTACCAACG 7619 Query 111913 GTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAA 111972 | | || | || ||| | || ||||| ||||| || ||| ||| || | || || Sbjct 7620 GAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGTACGTTG 7679 Query 111973 ACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGG 112029 |||||| ||| ||| || || |||| |||| |||||||||||||||||| Sbjct 7680 ACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGCACGCGG 7739 Query 112030 ATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCG 112089 || || | |||||||| || ||| | ||||| || | ||||| | || ||| | Sbjct 7740 ATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTGCCCGTG 7799 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 | | |||| ||||||||||||||| ||||||||||||||| | || ||| ||| ||| Sbjct 7800 ACTTGTTCTACGCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCG 7859 Query 112150 ATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAG 112208 | ||| | ||| | || || || || || || || | | |||| || || ||| Sbjct 7860 ACTGGACCCTCATGTGCCCCAACGAATGC-CCTGGATTGGCAGATGTTTACGGCGATGAG 7918 Query 112209 TTTGAAGCCCTCTACACAAAGTACGAGGAAGA----AA--GTCGGGCGACTGCGACGGTG 112262 || || || |||||| |||||| | || || |||| |||| | || Sbjct 7919 TTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACTATCAAGG-C 7977 Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 |||| || | ||| | | |||||| ||||||| || ||||| || | || | Sbjct 7978 CCAGAAGC-----TTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTTTC 8032 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||| | ||||| || ||||| |||| ||||| || || ||||| | ||| ||| Sbjct 8033 ATGTTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCGC 8092 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 || |||||||| || ||||| || | || | | | | ||||||| || |||||| Sbjct 8093 AGCTCCAACCTGTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAGGTTGCCGTGTGT 8152 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTGATT 112500 ||| | ||||| | || || || | ||||| || || | ||| | |||| || | Sbjct 8153 AACTTGGCATCCCTTGCCCTGCCGACATATGTTGA--CATGGCCAACGGCACATACGACT 8210 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || || ||||| || || | ||| || ||| | |||| | ||||| Sbjct 8211 TCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTCAAGAACTTGAACAAGATCATTGACG 8270 Query 112561 GAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || | |||||||| ||| | || | ||| | | ||| | ||| ||| Sbjct 8271 TCAACTACTACCCCGTCCCGGAGGCCAGACGCA---GCAATTTCCGTCACAGGCCAGTTG 8327 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 112677 | |||||||| ||||| || |||| |||| | | |||| | || ||||| Sbjct 8328 CCGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCCTTCGATTCTC 8387 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-G 112736 ||| || ||| |||| | | || |||||||| || || |||| || ||||| Sbjct 8388 CCGAGGCCAAGTTCCTCAACTCCCAGATCTTTGAGACCATCTACCACGGTGC-CTTGACT 8446 Query 112737 GCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796 || |||| |||| || || | || |||| || |||| ||||| || |||| Sbjct 8447 GCCTCCGTGGAGCTGGCCCAGATTCACGGCACATACGAGACCTACGAGGGATCCCCAGTG 8506 Query 112797 TCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACT 112854 || |||||| | ||| |||| || ||||||| || | || | | | | |||| Sbjct 8507 TC-CAAGGGTGAGCTCCAATACGACATGTGGG-GCGTTACTCCTACCGACCTGTGGGACT 8564 Query 112855 GGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 112914 ||||| ||||||||| | |||||| || | ||| | || ||| || | | |||| Sbjct 8565 GGGACTCTCTCAAGGCCCAGATCAAGCAGCACGGTGTCCGCAACTCCCTGCTCGTCGCAC 8624 Query 112915 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 112974 | ||||| || ||||||||| | || ||| | || || || ||||| || || |||| Sbjct 8625 CCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCATACA 8684 Query 112975 CGACGAACATCTA 112987 | |||||||||| Sbjct 8685 CCTCGAACATCTA 8697 >seq1081 Length=56605 Score = 145 bits (160), Expect = 9e-30 Identities = 346/513 (67%), Gaps = 15/513 (3%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873 ||||| || || ||| | |||||||| ||||| | |||| ||||| | | | ||| Sbjct 14863 TGGACAGCAGAGGAGATTGATCTCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAAT 14804 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || |||| | ||||| || | || || ||||| || | ||||||||||||| Sbjct 14803 GACGATGAGCGCTACTTCATCTCCCACGTTCTCGCTTTCTTCGCCGCGTCCGATGGAATT 14744 Query 101934 GTTTTTGAGAATATCAATAACAACTTT-GCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 101991 || ||||| || | ||| || | ||||| || |||| | ||||| | | Sbjct 14743 GTCAACGAGAACCTCCTCGAGCGCTTCAGCAGC-GAGGTCCAGATCC-CAGAAGCCCGCT 14686 Query 101992 CTTTCTATGCGTATCAATGTCATAAT-GAAATGGTGCATGGGGAGACATACAGTAAACTC 102050 ||||| | || || | |||| || || | | || | ||||||||| ||| Sbjct 14685 GCTTCTACG-GTTTCCAAATCATGATCGAGAACATTCACGCCGAGACATACTCCCTCCTC 14627 Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 || |||| || || ||||| ||| | | | ||||| | |||||| | || Sbjct 14626 ATCGACACATACATCAAGGAGCAGGCTCAACGCACATACCTCTTCAATGCCATCGAGACC 14567 Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCG 102167 |||| ||||| | ||||| || || ||||| | | |||| | |||| | || Sbjct 14566 ATTCCTTGTATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTC- 14508 Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227 | |||||||| |||| ||| | || || || ||| ||||||||||||||||| || Sbjct 14507 --TACCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGC 14450 Query 102228 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 |||||| | | |||| |||||||||||||| || |||||| | || || |||||| Sbjct 14449 TCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCG 14390 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| ||||| ||||| ||||| |||||| Sbjct 14389 AACGAGCTCATCTCCCGTGATGAGGGTCTCCAC 14357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620728479851680