Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1037 215 6e-51 seq1081 136 5e-27 >seq1037 Length=26954 Score = 215 bits (238), Expect = 6e-51 Identities = 933/1455 (64%), Gaps = 23/1455 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||||| ||||| || || ||||| || || || | ||| || | ||||||| Sbjct 8697 TAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAG 8638 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| ||||| | | || ||| || | ||| | | |||||| | || Sbjct 8637 GCAGTGGGCATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCC 8578 Query 106055 TTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113 |||||| |||||||| | | | | || | || ||||||| || |||| || Sbjct 8577 TTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATGTCGTATTGGAG 8519 Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAA 106173 | | || | |||| || || ||||| | ||||| || | || || | |||| Sbjct 8518 CTCACCCTTGGACACTGGGGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAG 8459 Query 106174 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 106233 || | || || || |||| || ||||| |||||||| | | || | Sbjct 8458 CTCCACGGAGGCAGTCAAGGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAA 8399 Query 106234 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTG 106293 |||||| || ||||| || | |||| | ||| |||| || ||||| || Sbjct 8398 CTTGGCCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTG 8339 Query 106294 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATA 106353 ||||| | ||| || ||||| || | ||| || || | ||||| || Sbjct 8338 GACACCAACGGCAACTGGCCTGTGACGGAAATTGCTGCGTCTGGCCTCCGGGACGGGGTA 8279 Query 106354 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 106413 | || |||||||| ||| | || ||| ||||| || ||||| || ||||| Sbjct 8278 GTAGTTGACGTCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAG 8219 Query 106414 TTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGC 106473 || | | || | |||| | | | ||||| | || ||||| | ||||| Sbjct 8218 CTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGCAAGGGATGC 8159 Query 106474 CAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTT 106533 ||| || || || || |||||| | | |||||| | ||| ||||| |||| ||| Sbjct 8158 CAAGTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGTT 8099 Query 106534 GGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTA 106593 ||| || || || || | ||||| ||||| ||||| |||||| ||||||||||| Sbjct 8098 GGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTA 8039 Query 106594 GAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGG 106652 | |||| | || | || ||||| ||||| |||| |||||| | | ||| | | || | Sbjct 8038 CAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTG 7979 Query 106653 CGGCTGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTC 106710 | || | || | ||| ||| | |||||| |||||| |||||| || || Sbjct 7978 GGCCTTGATAGTCTTGCGA---CCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTC 7922 Query 106711 AAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACC 106769 ||||| || || | || | | || || || || || || || | || | || Sbjct 7921 GAACTCATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTCC 7863 Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829 | | || || ||| || ||||||||||| || || |||||||| || | | || | Sbjct 7862 AGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAACA 7803 Query 106830 GATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 106888 || | ||| || | || || | || ||||| || || || |||||||| | | Sbjct 7802 AGTCACGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 7744 Query 106889 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGC 106944 | |||||||||||||||||||| |||| |||| || || | | | ||| | | Sbjct 7743 ACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCC-ACC 7685 Query 106945 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 107004 ||| | || || | || ||| ||| || ||||| ||||| || | ||| || | || Sbjct 7684 TTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGA 7625 Query 107005 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 107064 | || || || || ||| | | |||| | | | ||||| | || || Sbjct 7624 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCC 7565 Query 107065 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 107124 ||||| ||||| ||||||||| ||||| | | || || |||||||||| | Sbjct 7564 GATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTC 7505 Query 107125 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTAC 107183 || |||||||| || ||| | |||||| |||| ||| || || |||||||| Sbjct 7504 AATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTG-GGCCTGTGGTGTAC 7446 Query 107184 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTA 107241 ||||||||||||| ||||| | ||||| |||| || |||| ||||| || ||| Sbjct 7445 CAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTA 7388 Query 107242 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 |||||| | ||||| || || ||||| ||||| | || |||||||||| ||| Sbjct 7387 TGTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCAT 7328 Query 107302 GTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGT 107361 || || || | || | ||||||| || || |||| ||| ||| ||||| Sbjct 7327 GTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGGTAGGATCGCTCCAGGGT 7268 Query 107362 TTTGAGACCAAAGTA 107376 |||| || ||||| Sbjct 7267 CTTGAAGCCGAAGTA 7253 >seq1081 Length=56605 Score = 136 bits (150), Expect = 5e-27 Identities = 339/509 (67%), Gaps = 7/509 (1%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||||||||||||||| ||||| || || || || |||||| ||||| | |||||| || Sbjct 14357 GTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 14416 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| ||| Sbjct 14417 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACAGC 14476 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || |||| || |||| || |||| | ||| | | ||| | | ||| Sbjct 14477 AGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTGGATCCACCTAACTGC 14536 Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 117524 ||| | |||||||||| ||||| || | || | |||||| | || | | | Sbjct 14537 CCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCG 14596 Query 117525 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 117584 || || ||||| |||||| |||| || | || ||||| ||| | |||| | Sbjct 14597 TTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 14656 Query 117585 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCCG 117643 || || || | ||| | ||||||| |||| ||||| ||||| || || | | Sbjct 14657 CTCGATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-GCTG 14714 Query 117644 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 117702 | || | | || ||||| ||||||||||||||| | || ||||| || || Sbjct 14715 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCATCGGACGCGGCGAAGAAAGCGAGA 14774 Query 117703 ATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCT 117759 | || ||||| | |||| ||||| | || | |||||||||| ||| || Sbjct 14775 ACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCC 14834 Query 117760 TTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||||| | ||||| || || || ||||| Sbjct 14835 TTGGAGAGATCAATCTCCTCTGCTGTCCA 14863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589967569680560