Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq790 100 2e-16
seq528 96.9 2e-15
seq724 82.4 5e-11
>seq790
Length=49868
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 8/219 (4%)
Strand=Plus/Minus
Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826
|||| |||||||||| ||| || ||||| ||||| || ||||||||| | || ||
Sbjct 29730 CTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCA 29671
Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886
|| || ||||| || ||||| || || || || |||||||| | || | |||||||||
Sbjct 29670 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTG 29611
Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGT 34942
|| ||||| ||||| || | ||||| || | ||| || || | |||
Sbjct 29610 TCCTGGATCTTGGACTTGAC--AT--TGTCGATAGTATCGGACGACTCCACCTCAAGGGT 29555
Query 34943 TATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || ||||| || |||||||| ||||| |||||
Sbjct 29554 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 29516
>seq528
Length=17027
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| || || ||||||||||| ||||| || || || | || ||
Sbjct 15284 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGGGCGACCGTCCTCG 15225
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || |||||||| | || | ||||||||||| |
Sbjct 15224 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 15165
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
|||||| ||| || || | ||||| || | |||||| || | || |||||
Sbjct 15164 ATCTTCGATTTCAC--AT--TGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGT 15109
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || ||||| ||||| |||||||||||||||
Sbjct 15108 CTTGCCAGTGAGGGTCTTGACAAAGATCTGCATA 15075
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| |||||||| ||| | || | || || ||||| || || || ||
Sbjct 15494 TCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAA 15435
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| ||||||| ||||||
Sbjct 15434 ATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTA 15375
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | || || || | || || || || ||||| |||||||| |||
Sbjct 15374 TCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACA 15315
Query 34971 AAGATCTGCATA 34982
|| |||||||||
Sbjct 15314 AAAATCTGCATA 15303
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| ||||| || ||||| ||||||||||| || | | |||| ||
Sbjct 15968 ACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGCGTCCTCCCATCCTCG 15909
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || | || |||||||| | || | |||||||| || |
Sbjct 15908 AGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGA 15849
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | |||||| |||| || ||||| |||
Sbjct 15848 ATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTT 15789
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || | ||||| || || |||||||||
Sbjct 15788 CCGGTCAAGGTCTTGACGAAAATCTGCATA 15759
>seq724
Length=143787
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||| ||||| ||||| | ||| |||| || ||||| || || ||||| ||
Sbjct 12896 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 12837
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| || |||||||| | || | ||||||||||| |||||| ||||| || |
Sbjct 12836 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGAC--AT--T 12781
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| || || ||| || || | ||| ||||| || ||||| | ||||| ||
Sbjct 12780 GTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 12721
Query 34970 AAAG 34973
|||
Sbjct 12720 GAAG 12717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324626502089232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |