Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq528 116 3e-21
seq790 93.3 3e-14
>seq528
Length=17027
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||||||| || || ||| || ||||| ||||| || || || | ||| |||| ||
Sbjct 15512 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACCGTCCTCG 15453
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| || || || ||||| ||||| || |||| |||| ||||||||||| |
Sbjct 15452 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGA 15393
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | | | || || | |||||||| | ||||||||| ||
Sbjct 15392 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTG 15333
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| | ||| || ||||||||||||||
Sbjct 15332 CCCGTAAGAGTCTTGACAAAAATCTGCAT 15304
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || || ||| || ||||| ||||| || || ||| ||| |||| ||
Sbjct 15284 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGGGCGACCGTCCTCG 15225
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| || || || ||||| ||||| || |||| |||| |||||||||||| |
Sbjct 15224 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 15165
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| ||| ||| | | | || |||| ||| ||||||| || || || ||
Sbjct 15164 ATCTTCGATTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 15105
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | || || ||||| ||||||||
Sbjct 15104 CCAGTGAGGGTCTTGACAAAGATCTGCAT 15076
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
|||||| | || || | |||||| || ||||||||||| || || || || || ||
Sbjct 15987 GCCGCCGCGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTATAGTCGCT 15928
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
|| | | | || || | ||||||||| ||||| |||| ||||| || |||| ||
Sbjct 15927 CAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGTGG 15868
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
| |||||||| || |||||| || || | | | || || | ||| ||
Sbjct 15867 GATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAAC 15808
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| | ||||| || ||||| ||||| || || || |||||||||||
Sbjct 15807 CTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 15760
>seq790
Length=49868
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || ||| ||| || || || |||||||| || || | || | || ||
Sbjct 29724 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 29665
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| ||||| || ||||| ||||| || |||| ||| | |||||||||||
Sbjct 29664 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 29605
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | || || |||| ||||||||| | || || || ||
Sbjct 29604 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 29545
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||||| || || || || || |||||
Sbjct 29544 CCCGTCAGGGTCTTCACGAAGATTTGCAT 29516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380929271037462
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |