Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1037 255 1e-62 seq1081 188 1e-42 >seq1037 Length=26954 Score = 255 bits (282), Expect = 1e-62 Identities = 1222/1915 (64%), Gaps = 88/1915 (5%) Strand=Plus/Minus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCCCAGCCGTGC 212633 || ||| ||||||| || |||||||| |||||||| ||||| ||| ||||||| Sbjct 9054 GCGGCCATGGTGCGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTT---CCAGCCGGCA 8998 Query 212634 ATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGT 212693 | |||||| | ||||| |||| | || || |||| | | |||| Sbjct 8997 AAGTGCATGGATGTGA---TCTTGCCC---ATTGTCGGGTCCTTCATGTGG--------- 8953 Query 212694 AGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATA 212753 | ||| |||||||| || || ||||| | | | ||| |||||||| | | ||| Sbjct 8952 ATGTTGAGGGACTGGGATTGATCGATGAAGGCACCGCGGTCGGCGGCCATCTGGACGATG 8893 Query 212754 TCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCG 212813 | |||||||| |||||| ||||||||| ||| | |||| ||| | |||| | | Sbjct 8892 GTGCGCTGGGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTG 8833 Query 212814 GGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTTC 212870 ||||||||||| | || || | || | ||| | | | | ||||| ||| | Sbjct 8832 GGGATGTTCTGGATGGAGCCGCCGTCTGCAATGATGCGGTTCTT---CATGTTGTCGGAC 8776 Query 212871 CAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCT 212930 ||||| ||| || | ||| ||||| || |||||||| | ||||| || || Sbjct 8775 CAGAGACCCATGTCGACGAGGTCCTTGAGCAACCAGGGGTTGACGACTTGGAACTCGCCG 8716 Query 212931 GAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCC 212990 | || || | | | ||| | ||| || ||||| ||||||| || ||||||| || Sbjct 8715 GCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCG 8656 Query 212991 AGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCG 213050 || ||||| | ||| ||| ||||||||||| || || || || ||| | || ||| Sbjct 8655 AGGATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCGACGAGCAGGGAGTTGCGGACACCG 8596 Query 213051 TGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCC 213110 |||| ||| || | || |||||||||| |||||| Sbjct 8595 TGCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCA---------CAGGTCGGTAGGA 8545 Query 213111 TTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAG 213170 | ||| ||||||||| | || | || ||| ||| ||| |||| ||| | Sbjct 8544 GTAACGCCCCACATGTCGTATTGGAGCTCACCCTTGGACACTGGGGATCCCTCGTAGGTC 8485 Query 213171 GAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATG 213230 ||| | ||| || || ||||||||| ||| || || |||| ||| ||||||| Sbjct 8484 TCGTATGTGCCGTGAATCTGGGCCAGCTCCACGGAGGCAGTCAAGGCACCGTGGTAGATG 8425 Query 213231 GTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATG 213290 || ||||| |||| |||||| ||||||||| || || |||||| | | Sbjct 8424 GTCTCAAAGATCTGGGAGTTGAGGAACTTGGCCTCGGGAGAATCGAAGGGAAGGCGGAGA 8365 Query 213291 CGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTA 213350 |||| ||||||| || |||||||| || | | | | || ||||| | | || Sbjct 8364 GCCAGGAATGCATCAGCAAGACCCTGGACACCAACGGCAACTGGCCTGTGACGGAAATTG 8305 Query 213351 GA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 | | || |||| | |||||| ||||| ||| ||||||||||| | ||| Sbjct 8304 CTGCGTCTGGC-CTCCGGGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCAAGTTCTT 8246 Query 213410 GGTGGCCACTTTGGTGACATGG----GC--CAGGTACTCGTGATTGAACACGTAGCCCCC 213463 | | || | ||||| | | || | || | |||| || ||| | || Sbjct 8245 GACAACAACCTGTGTGACCTCGTGAAGCTTCTGGAAGTCGTATGTGC---CGTTGGCCAT 8189 Query 213464 GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGA 213523 ||| ||| | |||||||| | | |||| ||| || ||||| ||||| | | Sbjct 8188 GTCA---ACATATGTCGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGG 8132 Query 213524 GTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTG 213583 | | | |||||| | ||||| |||||||||||| || |||||||| || ||||||| Sbjct 8131 GGCAGAGTACTCGACAATCTCTGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTT 8072 Query 213584 GTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTA 213642 ||||| ||| ||| | |||| ||||||||| | |||| | ||| || ||||| Sbjct 8071 CTGGTTGCTCTT-GCGGTTGCAGGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAG 8013 Query 213643 GCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTC 213702 ||| ||| | || || | ||| || | | |||||||| | | ||| | Sbjct 8012 TCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTGC-GACCCTTA 7954 Query 213703 CGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACC-CTGTCC 213761 | | | |||||| ||||||||| | | ||| || | ||| | || ||| || Sbjct 7953 CCCTCCTT--CTCGTAGCCCTCGTAGAGCGCCTCGAACTCATCGCCGTAAACATCTG-CC 7897 Query 213762 AGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTG 213820 | ||| || || ||| ||||||||| ||||||| |||| | |||| ||| | || Sbjct 7896 AATCCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTC-GACACGCTT 7838 Query 213821 CATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCAC 213880 |||||| || ||||| | ||| || ||| ||||| ||| | || | || ||| Sbjct 7837 CATGAAGAGATCCGGAATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTT 7778 Query 213881 TCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTA 213940 || ||| || | || || || || ||||||| ||||||||||| ||||| | ||| Sbjct 7777 GCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCAACGTA 7718 Query 213941 GATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTT 213997 |||||| || || || | || | ||||| || ||||| || ||| || |||| Sbjct 7717 GATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTGGTCAACGTACCTTGCGGTGTTGTT 7658 Query 213998 GAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGA 214057 ||| | ||| || | || || | ||||| || | ||||||||| || || || || | Sbjct 7657 GAACACGCGGAGCATAGGGACAATGCCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGC 7598 Query 214058 GCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGAT 214114 || | ||| | | ||| | || | || || || || || ||| ||||| Sbjct 7597 ACCAGTGGCACGGATACGGTGG---ATATTCAATCCGATACCTCCAGCAGTCTTTGAGAT 7541 Query 214115 CATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAG 214174 |||||| || | | | || || ||| || | ||||| || || | | || | Sbjct 7540 CATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAATGCTATCCTCCTTCATGTCGAC 7481 Query 214175 CAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGG 214233 |||||||||| ||| |||| ||||||| | | |||| ||||| || || ||| | Sbjct 7480 CAAGAAGCAGGACGACAGCT-GGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAG 7422 Query 214234 CATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCA-GGACTGAGGGGATGTCG 214292 | || | | | ||| ||| | ||| |||| ||||| | | || || || Sbjct 7421 CGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCGATTGTCT-TCTCAATATCC 7363 Query 214293 TGCTTGTGGATCTGTAGAGCGCA--CCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTC 214350 | ||| | || | |||| | ||| | ||||||||| |||||||| | | Sbjct 7362 TCACCGTGAA--TGCCCACCGCAACACGCATAATCATGTGCTGTGGCCTCTC--AGCAAC 7307 Query 214351 CTTTGGGGCCCT------TGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGG 214404 ||| ||| | ||| |||||||| |||||||| |||||||| || ||||| Sbjct 7306 CTT----GCCATCAAGGCGGAGAAGGTAGGATCGCTCCAGGGTCTTGAAGCCGAAGTATT 7251 Query 214405 AGTAGGTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCTTCCGCGTGCTC 214459 |||| | ||| ||| | || ||||| || ||||| ||||||||||| Sbjct 7250 GGTAGTTGAAATCACGGTCGTAGAGGACGGCAGAGTTGAGCTCCTCCGCGTGCTC 7196 >seq1081 Length=56605 Score = 188 bits (208), Expect = 1e-42 Identities = 379/558 (68%), Gaps = 7/558 (1%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | |||||| ||||| |||| | || || || ||| ||||||| |||| |||| Sbjct 14335 AGAGGAGGCAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGA 14394 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || || |||| ||||| || | || |||||||||||||| | ||||| ||||| | Sbjct 14395 AGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 14454 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| ||||| || || ||||| || ||| | || | || | || | || Sbjct 14455 AGAAGAAGATACCCTCGACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCT 14514 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 | ||| |||||| || |||||||| |||||||||||||| || || || ||||| | Sbjct 14515 TATCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCGA 14574 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCA-CCTGCGTCCGCAACATAGGTAGTGAGCAGCTTT 48421 |||| |||||| | ||| | | ||||| ||| | || || || || Sbjct 14575 TGGCATTGAAGAGGTATGTGCGTTGAGCCTGC-TCCTTGATGTATGTGTCGATGAGGAGG 14633 Query 48422 GCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCC 48481 | ||| |||| | ||| | ||||| || ||| ||||| ||||||||| | ||| Sbjct 14634 GAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCT 14693 Query 48482 TCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCT 48541 || | ||| || || || ||| | ||| || || ||||| ||||| || ||||| Sbjct 14694 TCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCATCG 14753 Query 48542 GAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC- 48600 || || || ||||| || || || || | ||| | |||||| | || |||| || Sbjct 14754 GACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAG-GCG 14812 Query 48601 ---ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 |||||| | || | ||| ||| || || | || || | |||||||| || || Sbjct 14813 GTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGATGC 14872 Query 48658 GAGTGCTTTTTTGTACAT 48675 || || |||||||| Sbjct 14873 TTCCGCCTTCTTGTACAT 14890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931511910376960