Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1037 232 1e-55 seq1081 205 2e-47 >seq1037 Length=26954 Score = 232 bits (256), Expect = 1e-55 Identities = 828/1271 (65%), Gaps = 49/1271 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| |||| ||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 8445 GTCAAGGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGCCTCGGGA 8386 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 ||| |||||| | || || | | || | || || || ||||| || || | | Sbjct 8385 GAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCAACGGCA 8326 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCG-CTTCTGGCACGGGATAAAAGTTGACGTC 221595 | |||||||| | ||| ||| | | | || || ||||| || |||||||||| Sbjct 8325 ACTGGCCTGTGACGGAAATTGCT-GCGTCTGGCCTCCGGGACGGGGTAGTAGTTGACGTC 8267 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655 || | ||||| | |||| |||| ||| |||| || | || || | || Sbjct 8266 AATGATCTTGTTCAAGTTCT------TGAC---AACAACCTGTGTGACCTCGTGAAGCTT 8216 Query 221656 GAACACCAACTCGCC---GCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712 | || ||| ||||| | | | || ||| | | ||||||| | Sbjct 8215 ---CTGGAAGTCGTATGTGCCGTTGGCCATG---TCAACATATGTCGGCAGGGCAAGGGA 8162 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 |||| |||||||||||| ||||| || | | |||| | |||||||| || || Sbjct 8161 TGCCAAGTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAG 8102 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 |||| || |||||| || |||| || || || |||||| ||| || ||||| Sbjct 8101 GTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTT 8042 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||| | ||| || || || ||||| ||||| | | ||||| || ||| || | Sbjct 8041 GTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCT- 7983 Query 221893 TCTGGCGCTC-ACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCA 221951 ||||| || | ||| | | |||||| ||| || || || |||||| Sbjct 7982 TCTGGGCCTTGATAGTCTTGCGACCCTTACCCTC---CTTCTCGTAGCCCTCGTAGAGCG 7926 Query 221952 TGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGAC 222011 || |||| || ||||| | || ||| || || || | ||| ||||| || Sbjct 7925 CCTCGAACTCATCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGG 7866 Query 222012 TCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAA 222071 |||||| ||| | | ||| | || ||||||||| ||||| ||||| || || | | Sbjct 7865 TCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGA 7806 Query 222072 AGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAA 222131 | | || | || || |||||| ||||| ||| || |||| |||| ||||||| Sbjct 7805 ACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAA 7746 Query 222132 AAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCAC 222191 | | || |||||||| ||||| | |||| ||| | ||| || || ||||||||||||| Sbjct 7745 AGACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCAC 7686 Query 222192 CCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 | || || || ||| | | | | |||||| | ||| || | || || | ||||| Sbjct 7685 CTTGGTCAACGTACCT-TGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTC 7627 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG-CAGAC 222307 || |||||||| || |||||| ||||| ||| | || ||| ||| | | Sbjct 7626 GAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCAC---GGATACGGTGGATATTC 7570 Query 222308 ATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366 | |||||||| || || || ||| ||||||||||| || ||||||| ||||| ||| Sbjct 7569 AATCCGATACCTCCAGCAGTCTTT-GAGATCATGGCACAAGTCTTGAGTGTGTCATAGAT 7511 Query 222367 GCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGG 222425 ||||| || |||||||| | || | || || || ||||||| ||| | | ||| Sbjct 7510 ACCCTCAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGG 7451 Query 222426 TGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGAT 222485 || | || || || || || || || |||||||| ||||| |||||| || | Sbjct 7450 TGTACCA-GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGT 7392 Query 222486 CGTACGTCTCTA-CGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATG 222544 ||| ||||| | | || | | || | || |||||||| || || | ||| Sbjct 7391 TGTATGTCTCGATTGTCT-TCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATA 7333 Query 222545 TACATGTACTGGGGCCTCTCCACAGGACCCTTG-----GAGCTGGAGAGCAGGTACGATT 222599 ||||| ||| ||||||| ||| | ||||| || ||||| ||||| ||| Sbjct 7332 ATCATGTGCTGTGGCCTCT---CAGCAACCTTGCCATCAAGGCGGAGA--AGGTAGGATC 7278 Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659 ||||| |||||||| || ||||| | | || || || | | ||| | ||||| | Sbjct 7277 GCTCCAGGGTCTTGAAGCCGAAGTATTGGTAGTTGAAATCACGGTCGTAGAGGACGGCAG 7218 Query 222660 CGTCCAGCTCC 222670 || |||||| Sbjct 7217 AGTTGAGCTCC 7207 >seq1081 Length=56605 Score = 205 bits (226), Expect = 2e-47 Identities = 557/854 (65%), Gaps = 16/854 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| || || |||||| || || ||||||||||| Sbjct 14899 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 14840 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| | ||| | Sbjct 14839 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGCTACTTCATCTCC 14780 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || || ||||| || || |||||||| || |||| | Sbjct 14779 CACGTTCTCGCTTTCTTCGCCGCGTCCGATGGAATTGTCAACGAGAACCTCCTCGAGCGC 14720 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| ||| || || ||| | || ||| || |||||||||||||| || ||| Sbjct 14719 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 14660 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||| | ||| || || || || || || ||||| | || Sbjct 14659 GAGAACATTCACGCCGAGACATACTCC---CTCCTCATCGACACATACATCAAGGAGCAG 14603 Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || | | | || || || |||||||||| ||| || | ||||||| |||||| Sbjct 14602 GCTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGTATCAAGAAGAAGGC 14544 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| | | ||||||| | || |||| |||| |||| || || || Sbjct 14543 CGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCTCGTTGC 14484 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||| |||||||| ||||| ||||| ||| ||| || || || |||| ||||||||||| Sbjct 14483 CTTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCAA 14424 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||| | || ||| ||| || |||||||||||| | | || ||||| Sbjct 14423 GAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAGGG 14364 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069 |||||||| || || |||||||| |||| | | |||| | ||| || || Sbjct 14363 TCTCCACACCGACTTCGCCTGCCTCCTCTTCTC---CCACCTTAGACAC-CGCCCAAGCA 14308 Query 26070 AG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128 || || ||||| | |||| | |||||||| |||||| | ||||| Sbjct 14307 AGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCTTGACTG 14248 Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188 | ||||||||| || | |||| ||||||||||||| Sbjct 14247 AGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAGT 14188 Query 26189 ATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248 || |||||| |||||| | || || || | ||||| || | |||| Sbjct 14187 TCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAACC 14128 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 | |||||||| ||||| ||||| || ||| ||| |||||||||||||| || ||| | | Sbjct 14127 CATTCGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCG 14068 Query 26309 TCGGCGACTATCAA 26322 ||| |||||| ||| Sbjct 14067 TCGCCGACTACCAA 14054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928823970655360