Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1037 114 1e-20 seq528 96.9 3e-15 >seq1037 Length=26954 Score = 114 bits (126), Expect = 1e-20 Identities = 1051/1677 (63%), Gaps = 62/1677 (4%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCG-CGGTATTGTTGCA-ATATTTT 138415 |||||||| ||||||||||| || | || |||| ||| ||||| || || | Sbjct 8880 ATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT--GTCGGCGGGGATGTTGGGGATGTTCT 8823 Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475 | ||| ||| | | ||||||||||| || |||||| ||| | ||| || | Sbjct 8822 GGATGGAGCCGCCGTCTGCAATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGT 8763 Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535 || | ||| || | || | ||| | ||| || || || ||||||| || || | Sbjct 8762 CGACGAGGTCCTTGAGCAACCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACACGGC 8703 Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595 | ||| ||||| |||| | ||||| || | |||||| || || ||||| | | Sbjct 8702 GCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGG 8643 Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655 ||| || || |||||| || || | || || || || | |||||| ||||||| Sbjct 8642 TGGAGGCAGTGGGCATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCT 8583 Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715 | ||||||| || ||||||||||| ||| |||| | | |||||| ||||| | Sbjct 8582 GGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGCCCCACATGTCGTATT 8523 Query 138716 GTAACATTCCC----AAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAA-ACTC 138770 | | | ||| | ||| | ||| || ||||| | |||||| || | || Sbjct 8522 GGAGCTCACCCTTGGACACTGG--GGAT--CCCTCGTAGGTCTCGTATGTGCCGTGAATC 8467 Query 138771 TTGCGCCAACTCGTTGCTCGCC-TCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCT 138829 | | |||| ||| | || || || ||||| | ||| || || || ||||| Sbjct 8466 TGG-GCCAGCTCCACGGAGGCAGTCAAG-GCACCGTGGTAGATGGTCTCAAAGATCTGGG 8409 Query 138830 GATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGG 138889 ||||| || |||||||| ||| | || | |||||| | ||| || || | Sbjct 8408 AGTTGAGGAACTTGGCCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAG 8349 Query 138890 CCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTT 138949 | || || || || || || | || || | || || | ||| | || | || | || Sbjct 8348 CAAGACCCTGGACACCAACGGCAACTGGCCTGTGACGGAAATT-GCTGCGTCTG-GCCTC 8291 Query 138950 CGATA--GGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT 139007 || | || || ||||| || || ||||| ||||| || || || || |||| || Sbjct 8290 CGGGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGT 8231 Query 139008 CGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAA 139066 | | | || | | | || ||||||||||| || | | | ||| ||| Sbjct 8230 GACCT-CGTGAAGCTTCTGGAAGTCGTATGTGCC---------GTTGGCCATGTCAACAT 8181 Query 139067 ATTTGTTGACACA--AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTA 139124 || || | || || || || | ||| ||||| || || || || ||| | ||| Sbjct 8180 AT--GTCGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGGGCAGAGTA 8123 Query 139125 TTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCT 139184 |||||||| || | |||| || | ||| ||||| | || | || ||||| Sbjct 8122 CTCGACAATCTCTGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCT 8063 Query 139185 TTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTC 139244 || ||||| || ||||| ||||| | ||| | || | || || || || | ||| Sbjct 8062 CTTGCGGTTGCAGGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTC 8003 Query 139245 TATAATGAATTTGAACAAGTCCCTAG--CTTG-TATT-TGACGCACGTAAAGTTCGTCGC 139300 | |||| | | | ||| || | |||| || | | || | | | || | Sbjct 8002 GAGAATGGAGTACCA-AAGCTTCTGGGCCTTGATAGTCTTGCGACCCTTACCCTCCTT-- 7946 Query 139301 GCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGAC 139360 |||||| |||||||| | ||||| || ||||| | || | | | | | Sbjct 7945 -CTCGTAGCCCTCGTAGAGCGCCTCGAACTCATCGCCGTAAACATCTGCCAATCCAGGGC 7887 Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420 | | || || |||||||| | ||| |||||||| || ||| ||| ||||||| |||| Sbjct 7886 ATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGAT 7827 Query 139421 CCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTAC 139480 |||||||||| | |||| | | ||| || || || || ||| || ||| Sbjct 7826 CCGGAATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCT 7767 Query 139481 GTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTG 139540 | ||| || ||||| ||||| || || ||||||||||| || | |||||||| | | Sbjct 7766 TTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAG 7707 Query 139541 CGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCA 139597 | || || ||||||||||| || |||| | | | | || ||||| ||||| | Sbjct 7706 CACCAGGGCGCTTGTTGCCACCTTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGA 7647 Query 139598 ACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGA 139653 ||| || | | ||| ||| |||||||||| || | | ||| | || Sbjct 7646 GCATAGGGACAATGCCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGT----G 7591 Query 139654 GCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA 139713 || |||| || | ||| | ||||| || || || || || || | | ||| Sbjct 7590 GCACGGATACGGTGGATATTCAATCCGATACCTCCAGCAGTCTTTGAGATCATGGCACAA 7531 Query 139714 -TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCA 139772 || | | ||| || || ||||| ||||| || |||| ||| ||||| ||||| Sbjct 7530 GTCTTG-AGTGTGTCATAGATACCCTCAATGCTATCCTCCTTCATGTCGACCAAGAAGCA 7472 Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832 ||||| || || | || || || || || || || || ||||| ||||| Sbjct 7471 GGACGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA 7412 Query 139833 -CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGA 139891 ||||| ||||| | | ||| || ||||| | || |||||||| ||||| | Sbjct 7411 GTATTTG-GAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCACCGTGAA 7353 Query 139892 TACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAttt 139951 | || || | || ||||| | ||| || || || || || ||| ||| || | Sbjct 7352 TGCCCACCGCAACACGCATAATCATGTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGGC 7293 Query 139952 ttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 || || | || ||| ||||||||| |||| ||||| ||||||||||| Sbjct 7292 GGAGAAGGTAGGATCG--CTCCAGGGTCTTGAAGCCGAAGTATTGGTAGTTGAAATC 7238 >seq528 Length=17027 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| || ||||| || || || || |||||| ||||||| ||||| || Sbjct 14932 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 14991 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || ||||| | | | | || || || ||||| || ||||| ||||| || ||| Sbjct 14992 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 15051 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| | || ||||||| || Sbjct 15052 TTGGTCCTTCGTCTGCGCGGTGG 15074 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||| || || ||||| ||||| || || | | Sbjct 15760 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCG 15819 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || || || || || Sbjct 15820 GACACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 15879 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||||||||| || || ||||| |||||| ||| | || || |||||| Sbjct 15880 CAGCGTTTGATCTTTGCTGGTAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTATAAC 15939 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || ||||||||| | || | ||||| ||| Sbjct 15940 ATCCAGAAGGAGAGCACGCTTCACTTGGTGCTCCGTCTTCGCGGCGGC 15987 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || || ||||| || || |||||||| ||||| || | | Sbjct 15532 ATGCAAATCTTCGTTAAGACCCTCACCGGAAAGACAATTACGCTAGAAGTCGAGTCGTCG 15591 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||| || || || || || || || || Sbjct 15592 GATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 15651 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||||| |||||| | | | |||| || || ||| Sbjct 15652 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGACTACAAC 15711 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || ||||| || || ||||| |||| Sbjct 15712 ATCCAGAAGGAGTCTACGCTACATCTTG 15739 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || | || || || | || Sbjct 15076 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 15135 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| || ||||| || || || ||||| || || Sbjct 15136 GACACCATCGACAATGTGAAATCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 15195 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||||| ||||| | |||| || || ||| Sbjct 15196 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCCCTCTGTCCGACTACAAC 15255 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| ||||| || |||||||| | || | ||||| || Sbjct 15256 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGCGGTGG 15302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449887511046320