Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1081 149 1e-29 seq952 120 5e-21 seq1037 118 2e-20 seq548 118 2e-20 seq519 107 3e-17 >seq1081 Length=56605 Score = 149 bits (164), Expect = 1e-29 Identities = 211/292 (72%), Gaps = 5/292 (2%) Strand=Plus/Plus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 ||||| | ||||||||| |||||||||||||| || |||| ||| ||| ||||| Sbjct 14400 AGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAG 14459 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||| |||||||| || || ||| | ||||| |||| ||||| || | || | | Sbjct 14460 AAGATACCCTCGACAGCAGCGAAGGCAACGAGACGCTGAGCAAA--GGTAGAATCCTTAT 14517 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 | | ||||||| | | ||||| || ||||| ||| | | | || | || |||||| Sbjct 14518 CT-TGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCGATG 14576 Query 794557 GCGCGAAAGAGGT-GGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615 || ||||||| || | | | || | ||||||| ||| |||||||||||||| || Sbjct 14577 GCATTGAAGAGGTATGTGCGT-TGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGA 14635 Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| ||||| | ||| ||||| ||||| ||| ||||| || || |||||| Sbjct 14636 GTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 14687 Score = 131 bits (144), Expect = 3e-24 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||| | |||||| |||||| ||||||||||| || | || ||||| |||||| Sbjct 14058 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCATG 14117 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| || | ||||| ||||||| ||||| || ||||| | | Sbjct 14118 AAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCTG 14177 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||||||||| |||||||| || ||| | | |||||||||||||| ||||| | Sbjct 14178 TCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAG 14237 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 || || | ||| | | ||||||| |||||| ||| |||||| | |||| Sbjct 14238 GGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGACAGCCTCGGTAATGA 14289 >seq952 Length=39414 Score = 120 bits (132), Expect = 5e-21 Identities = 325/482 (67%), Gaps = 24/482 (5%) Strand=Plus/Minus Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 || |||| |||||||| | ||| || ||||| ||||| |||||||| ||||||| | Sbjct 7438 GCGAAGGTGAAGATCTTCCTCTGATCCACGCCGCCGAACTGCGCGTCGACATCGAGGTAC 7379 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTG-CGGTC 2411621 ||||| || || ||||||||||| ||||||| || | |||| ||||| | | || Sbjct 7378 TGCTCATCCAGCGCCTGCATGAGGGGGTAGATCAGTCCCCCCAGCGTCGGGTCGTCCGT- 7320 Query 2411622 CATCTTGACCACCTGGGCGGCGGCCTTTTGCGCCGTGCCGACGGTCACGCG-----CGCC 2411676 | ||| ||||||| || | ||||| |||| ||||| | | ||| |||| Sbjct 7319 CTGCTTCACCACCTCCGCTCCCGCCTTCTGCG------CGACGCTGATGCGTGTTACGCC 7266 Query 2411677 GTC-AGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCAC 2411735 || || ||| |||| | |||||| | ||| ||||||| |||||| | || Sbjct 7265 TTCGAGCTTGAAGCGGTCCATGGTGTAGTCTTTGCCTAGCTGGTAGGAGCTGCCTAGTAC 7206 Query 2411736 AAATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGAT--GGCAAAC 2411793 |||||||| | || |||||| | | |||| | ||| ||||| ||| || Sbjct 7205 GAATTCGAGGAGGGAGAGATCGACGCCGACGGCGCGGAGGAGGGCTTTGATCAGGC-GAC 7147 Query 2411794 TCGTACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGC-CATTGTCGAGGT 2411851 | ||| | || || ||| ||||||||| | | | || | ||| | || ||||||| Sbjct 7146 T-GTAGTAGGCTGC-GCGGAACTCGACGAGCT-CGAGGGGGGCTTTCATGTTATCGAGGT 7090 Query 2411852 GGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCA 2411911 | |||| | ||| || | ||||||| | || | ||||| || ||||| | ||||| | Sbjct 7089 AGCCGTGGATGTCAGCCAGGAGGATCTTGACGTGGCATCCTGCGTGGAGGAGCTCGGCGA 7030 Query 2411912 GTTTAAAGATGGGCACAAAGTA-GCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAA 2411970 || | || || || ||||| || ||| |||| | ||||| | ||| || ||||| Sbjct 7029 TCTTGATAATAGGAACGAAGTACGCGCAGTGAGGGCGT-CCCGTTGTCGCAGTACCCCAG 6971 Query 2411971 TA 2411972 || Sbjct 6970 TA 6969 >seq1037 Length=26954 Score = 118 bits (130), Expect = 2e-20 Identities = 355/540 (66%), Gaps = 20/540 (4%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 || |||||||| || ||||| | | | || | | |||||| || |||||||| ||| Sbjct 9084 TGATCGACGGTGAATTGGATAGGGGCCGATGCGGCCATGGTGCGGAGGTAGTACATTCCG 9025 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCG-GCAT--TC 2069367 |||||||||||| | ||| || |||||| || ||||| || | ||| || Sbjct 9024 GTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGGATGTGAT---CTTGCCCATTGTC 8968 Query 2069368 GGGACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427 ||| | || || |||||| |||||| || |||| ||| |||||||||| Sbjct 8967 GGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAGGCACCGCGGTCGGCG 8908 Query 2069428 GCCAT---GTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTG 2069484 ||||| | ||||||| ||| | ||| | |||||| ||||||||| | ||||||||| Sbjct 8907 GCCATCTGGACGATGGT---GCGCTGGGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTG 8851 Query 2069485 AGATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGG 2069544 | | |||||| | || | | ||| | ||||| |||| |||| | Sbjct 8850 ATGT-CGGCGG-----GGATGTTGGGGATGTTCTGGATGGAGCCGCCGTCTGCAATGATG 8797 Query 2069545 CGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGG 2069604 |||| | || | | ||| || || | | | | || || || | || Sbjct 8796 CGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACGAGGTCCTTGAGCAACCAGGGG 8737 Query 2069605 TTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATGAC 2069663 ||||| || || ||||| | || || ||||||| ||||||||| ||| ||| Sbjct 8736 TTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTATG-G 8678 Query 2069664 CTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCAC 2069723 |||| | |||| || ||| |||||||| || || | ||| ||||||||| | || || Sbjct 8677 CTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCGAC 8618 Query 2069724 GAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCA 2069783 |||||| |||||||| | |||| ||| | | | ||| || | |||||||||||| Sbjct 8617 GAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCA 8558 Score = 89.7 bits (98), Expect = 8e-12 Identities = 174/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || || | || |||| ||| || ||||||||||| || |||| |||||| || Sbjct 7683 TGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAG 7624 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | |||||||| || || | ||| || || | ||| || | ||| || ||| Sbjct 7623 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCG 7564 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || || || | ||| ||||| | || || | || || || || ||||| ||||| Sbjct 7563 ATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCA 7504 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || || |||||||||| | || ||||| ||||| || | | | || || Sbjct 7503 ATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACCA 7444 Query 2073781 GCATTGAAGAGCGTGGG 2073797 ||||||||||| || || Sbjct 7443 GCATTGAAGAGTGTTGG 7427 >seq548 Length=85367 Score = 118 bits (130), Expect = 2e-20 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | ||||||||| |||||||||| |||||||||||||||||||| | || Sbjct 1871 CTCTTCGAGATCATCCTCGCCTCCAACTACCTGGACATCAAGCCCCTCCTCGACGTCGGC 1930 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||||||||| || | || ||||| ||| |||||||| || | ||||| ||| Sbjct 1931 TGCAAGACCGTGGCGAATATGATTAAGGGGAAGAGTCCCGAGGAGATTAGGAAGACGTTT 1990 Query 2035749 AACAT 2035753 || || Sbjct 1991 AATAT 1995 >seq519 Length=137297 Score = 107 bits (118), Expect = 3e-17 Identities = 173/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 ||||| | || ||||| ||| | |||| ||||| ||||||||| || | ||||| | Sbjct 90679 CTGCCCCAAGGGCGCCAAAAGCTTGTCATTCTCGACGAGGCCGACAGCATGACGTCTGGT 90738 Query 2019255 GCCCAGCAGGCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCT 2019313 ||||| || ||||| || ||| |||||||| | ||| | || || || || || | Sbjct 90739 GCCCAACAAGCCCTGCG-TCGCACCATGGAGATCTACTCTTCGACCACCCGCTTCGCATT 90797 Query 2019314 GGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCG 2019373 || ||||| ||| | | ||||||| |||| ||| ||||| ||||||||||| Sbjct 90798 CGCGTGCAATCAGTCAAACAAGATCATCGAGCCCCTGCAGTCACGTTGTGCCATCTTGCG 90857 Query 2019374 CTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGA 2019433 || ||| | || || || || || ||| ||| |||| | |||||||||| || || Sbjct 90858 CTATGCAAGGCTAACGGATGCACAAGTCGTGAAGCGCCTGCTCCAGATTATCGAGGCGGA 90917 Query 2019434 AAAGGT 2019439 ||||| Sbjct 90918 GAAGGT 90923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916055564037566