Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1180 89.7 4e-12 >seq1180 Length=34342 Score = 89.7 bits (98), Expect = 4e-12 Identities = 242/368 (66%), Gaps = 3/368 (1%) Strand=Plus/Plus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || || |||||||| | ||| || ||||| || ||||| || || || | | || ||| Sbjct 19677 ATTCCGTTGGCATCGAGATCGAAGGTGACCTCGATTTGGGGAACACCACGGGGTGCGGGT 19736 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | || | |||| || || || || ||| || || ||| Sbjct 19737 GGGATACCGGTGAGCTCGAACTTGCCCATCAGGTTGTTGTCCTTGGTGCGCTTGCGCTCA 19796 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||||||| | ||||| || ||| || || || || | || | || || | Sbjct 19797 CCCTCGAAGACCTGGATCAGGACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTCG 19856 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || || || || || || ||||| | | || | | |||||| |||||||| || Sbjct 19857 GACTTCTTGGTTGGGATGGTGGTGTTGCGGTTGATGAGAGGGGTCATGATACCACCGGCA 19916 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATT-TTGAAGTTTTTC 281739 || || | ||| ||||| ||||||| |||||| | |||| || | ||| | ||| Sbjct 19917 GTCTCAATACCGAGAGACAGAGGAGCGACATCCAAAAGGAGGATCTCGTTGGTGGACTTC 19976 Query 281740 ATCA--GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 | || | |||| ||||| ||||| || | ||||||||||| || ||||| ||| Sbjct 19977 GACGAGGTGTCACCAGAGAGAATTGCTGCCTGCACGGCAGCACCATAGGCGACAGCCTCA 20036 Query 281798 TCAGGATT 281805 ||||| || Sbjct 20037 TCAGGGTT 20044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740542322181444