Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1037 150 2e-31 seq528 127 2e-24 seq790 125 7e-24 seq724 96.9 3e-15 >seq1037 Length=26954 Score = 150 bits (166), Expect = 2e-31 Identities = 842/1331 (63%), Gaps = 45/1331 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 |||||| || || ||||| || || ||||| |||||||| | | || || |||| Sbjct 8943 GACTGGGATTGATCGATGAAGGCACCGCGGTCGGCGGCCATCTGGACGATGGTGCGCTGG 8884 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 ||||||||| | |||||||| || |||||| | |||| ||| | |||| Sbjct 8883 GAG---ATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATG 8827 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | ||||||| || |||| || | || ||| | ||| | | || Sbjct 8826 TTCTGGATGGAGCCGCCGTCTGCAATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCC 8767 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| ||||| | || || | | || || || || ||||||||||| || || Sbjct 8766 ATGTCGACGAGGTCCTTGAGCAACCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACA 8707 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| || | ||| || | || || || |||||||| ||| | ||||| Sbjct 8706 CGGCGCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGG 8647 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||| | || ||||||||| || || ||||| |||||||| | |||| | | || Sbjct 8646 GAGGTGGAGGCAGTGGGCATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTG 8587 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || | | ||| |||| |||||||||| || | || || ||| |||||||||| Sbjct 8586 ATCTGGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGCCCCACATGTCG 8527 Query 148470 TACTGCAG-AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 || || || || || | |||| | |||||||| | ||| | ||||| Sbjct 8526 TATTGGAGCTCACCCTTGGACACTGGGGAT-CCCTCGTAGGTCTCGTATGTGCCGTGAAT 8468 Query 148529 CGCCGCCAGTTCGCAGCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587 | ||||| || | || || || || |||| ||| || ||||| || || Sbjct 8467 CTGGGCCAGCTCCACGGAGGCAGTCAAG-GCACCGTGGTAGATGGTCTCAAAGATCTGGG 8409 Query 148588 TGTTGAGCAGCGCCGCCGACTCG---CTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644 |||||| | | || |||| ||| | || | || || || || || | Sbjct 8408 AGTTGAGGAACTTGGC---CTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCAT 8352 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 | ||||| ||||| || || ||| ||| |||| ||| | ||| | | | || Sbjct 8351 CAGCAAGACCCTGGACACCAACGGCAACTGGCCTGTGACGGAAATTGCTGCGTCTGGCCT 8292 Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTT 148763 | || || |||| |||| ||| ||||||||| ||||| || || || |||| | Sbjct 8291 CCGGGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCAAG-TTCTTGACAACAACCTGT 8233 Query 148764 GTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATG----CATCGGT--TC 148817 || | | | ||| | || ||||| || | | | ||| ||| || | Sbjct 8232 GTGACCTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGC 8173 Query 148818 ACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATC 148877 | ||| | || || | || |||||||| |||||| ||||| |||||| || ||| Sbjct 8172 AGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATC 8113 Query 148878 TCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTG 148937 || | |||||| ||| || ||| || | |||||| || |||||||||| |||| Sbjct 8112 TCTGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTG 8053 Query 148938 CACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---G 148994 || || |||||||||| |||| | || || || || ||| | || | || | Sbjct 8052 CAGGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAG 7993 Query 148995 AACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCG------ACCCTCCTGCTCG 149048 ||| | || | ||| || |||| | || | ||| |||||||| |||| Sbjct 7992 TACCAA---AGCTTCTGGGC-----CTTGATAGTC-TTGCGACCCTTACCCTCCTTCTCG 7942 Query 149049 TATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108 || || ||| ||||||| | |||||||| ||| | | || ||||| | | Sbjct 7941 TAGCCCTCGTAGAGCGCCTCGAACTCATCGCCGTAAACATCTGCCAATCCAGGGCATTCG 7882 Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168 | ||||||||||| | ||| |||||| | | || |||||||| || ||||| || Sbjct 7881 TTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGA 7822 Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 | |||||| ||||| | | ||| || || | || || ||| ||| | | Sbjct 7821 ATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTC 7762 Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288 | || || | || | ||||||||||| ||||||| ||| | |||| || || Sbjct 7761 AAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCA 7702 Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345 |||| ||||| || ||||| |||| | | ||||||| ||||| || | |||| Sbjct 7701 GGGCGCTTGTTGCCACCTTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATA 7642 Query 149346 GGTTCAATGCC 149356 || ||||||| Sbjct 7641 GGGACAATGCC 7631 >seq528 Length=17027 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||||| ||||| || ||||| || || ||| ||| ||||||||| Sbjct 15509 AAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGACC-GTCCTCGAG 15451 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||||||| |||| || ||||||||||| ||||| || || |||||||| || Sbjct 15450 CTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAAT 15391 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| || |||| | ||||| || | || | || ||||| Sbjct 15390 CTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTGCC 15331 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || ||||||||||| Sbjct 15330 CGTAAGAGTCTTGACAAAAATCTGCAT 15304 Score = 120 bits (132), Expect = 3e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| || | || ||| ||||||||||||||||| Sbjct 15272 GTCGACTCCTTCTGAATGTTGTAGTCGGACA--GAGGGCGACCGTCCTCGAGCTGCTTGC 15215 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 ||||| |||| || ||||||||||| ||||| ||||| |||||||| ||||| | Sbjct 15214 CCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGATT 15155 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||||| | ||| || || | |||| ||| ||||| || || | Sbjct 15154 TCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGG 15095 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 15094 TCTTGACAAAGATCTGCAT 15076 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||||| || ||||| ||||| || ||||| || || ||| | | | |||||||||| Sbjct 15735 ATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA-TCCTCGAGCT 15677 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||||||| |||| || ||||||||||| || |||||||| ||||| || ||||| Sbjct 15676 GCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCT 15617 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | || || | | ||| || || | || | || || |||| Sbjct 15616 TAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCTAGCGTAATTGTCTTTCCGG 15557 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || ||||| || ||||| Sbjct 15556 TGAGGGTCTTAACGAAGATTTGCAT 15532 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| ||||| || || || |||| || ||| | |||||||||||||| || || | Sbjct 15951 CTCCTTCTGGATGTTATAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCAAA 15892 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 || | ||||||||||| || ||||| || ||||| || ||||| ||||| | Sbjct 15891 GATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTT 15832 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 |||| ||||| | | ||| || |||| || | ||| || ||||||| || || || Sbjct 15831 GTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGAC 15772 Query 133649 GAAAATCTGCAT 133660 |||||||||||| Sbjct 15771 GAAAATCTGCAT 15760 >seq790 Length=49868 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || |||||||| | ||| | | | |||||||| Sbjct 29721 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCA-TCCTCGAG 29663 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || || ||||||||||| || ||||| || |||||||| ||| Sbjct 29662 CTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGAT 29603 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | || |||| | |||||| || | ||||| || ||||| Sbjct 29602 CTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTGCC 29543 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 ||||| || || ||||| || |||||| || Sbjct 29542 CGTCAGGGTCTTCACGAAGATTTGCATGACT 29512 >seq724 Length=143787 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| || | || || ||||||||||| ||||| || || |||||| Sbjct 12863 TCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTG 12804 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | || |||| || ||| || || | ||||| | Sbjct 12803 TCTTGGATCTTCGACTTGACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATG 12744 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| |||| || || ||||| Sbjct 12743 GTCTTGCCCGTCAAGGTCTTGACGAA 12718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483409959288560