Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq528 93.3 1e-13
seq790 87.8 4e-12
>seq528
Length=17027
Score = 93.3 bits (102), Expect = 1e-13
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || ||||| || || || ||||||||||| || || || |||
Sbjct 15079 CAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCCGAC 15138
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || || |||||||| || || || || ||| |||||| ||
Sbjct 15139 ACCATCGACAATGTGAAATCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 15198
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||| || |||||| | || || || | || || |||| |||||| |
Sbjct 15199 CGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCCCTCTGTCCGACTACAACATT 15258
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| |||||||||
Sbjct 15259 CAGAAGGAGTCGACTCTTCAC 15279
>seq790
Length=49868
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| | || ||||| || || || ||||
Sbjct 29531 AAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGATACTATCGACAAT 29590
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || ||||| |||||| || | || ||||||
Sbjct 29591 GTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCAGCAGCGCCTGATCTTC 29650
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || ||||| | || | | ||||||||| ||||||| |||||
Sbjct 29651 GCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCC 29710
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||| | || ||||||||||
Sbjct 29711 ACCCTTCACTTGGTCCTGAGACTTCG 29736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181793635110274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |