Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1081 214 3e-49 seq1037 134 2e-25 seq519 113 6e-19 >seq1081 Length=56605 Score = 214 bits (236), Expect = 3e-49 Identities = 359/507 (71%), Gaps = 12/507 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || || || ||||| || |||||| | || | Sbjct 14900 GATCTGGCAGATGTAC-AAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATC 14842 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| ||| | | ||||| |||||| | |||||| Sbjct 14841 TCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGCTACTTCATCT 14782 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| ||| |||||||| |||||| || || ||||||||| || Sbjct 14781 CCCACGTTCTCGC-TTTCTTCGCCGCGTCCGATGGAATTGTCAACGAGAACCTCCTCGAG 14723 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | | |||||||| | ||||| || || | || ||||| ||||| ||| Sbjct 14722 CGCTTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 14663 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 ||||| ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | | Sbjct 14662 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 14603 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | | | || ||||||| |||||||| || | || | | | ||| ||||| Sbjct 14602 GCTCA-ACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGTATCAAGAAGAAGGC 14544 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGG-AGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189 ||||||||| | | ||||||| |||| | || || || |||||| |||| ||||| Sbjct 14543 CGACTGGGCAGTTAGGTGGATC--CAAGATAAGGATTCTAC-CTTTGCTCAGCGTCTCGT 14487 Query 1456190 CGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248 | ||| || || |||||||| ||||| ||||| ||| ||| | |||| || ||||| Sbjct 14486 TGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCT 14427 Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||| ||||||||| | || || Sbjct 14426 CAAGAAGCGTGGCCTCATGGCTGGCCT 14400 Score = 95.1 bits (104), Expect = 2e-13 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590 |||||| ||| |||||| ||||||| | | ||| | || || ||||| |||| Sbjct 14282 CGAGGCTGTCAGCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGG 14223 Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 ||||||||||| | | ||| || |||||||| || ||||||||| | ||||| Sbjct 14222 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGACAGGCTGCTGCTC 14165 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710 | ||||| || ||||| ||||| | || ||||||| ||| | |||||| || Sbjct 14164 TCCCTCGGTAACG-AGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACAT 14106 Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGG 1456769 ||| || | || ||||||||||| |||||| ||||| | ||| ||| ||| | || Sbjct 14105 CTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGG 14046 Query 1456770 CGTCA 1456774 |||| Sbjct 14045 TGTCA 14041 >seq1037 Length=26954 Score = 134 bits (148), Expect = 2e-25 Identities = 365/547 (67%), Gaps = 30/547 (5%) Strand=Plus/Plus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGA-CAGCATGGCCTGCGCAACTCGTTGCT 262937 |||||||||||| | || ||| | | || | ||||| || | |||||||| |||| Sbjct 8558 TGGGACTGGGACTCTCTCAAGGCC-CAGATCAAGCAGCACGGTGTCCGCAACTCCCTGCT 8616 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 ||| || | ||||||||| ||| | || || |||||||| ||| || |||| ||||| Sbjct 8617 CGTCGCACCCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGA 8676 Query 262998 GGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCA 263056 | ||| ||| ||||||||| ||||||| || || | ||||| || || |||| Sbjct 8677 GC-CATACACCTCGAACATCTACTCGCGCCGTGTCCTGGCCGGCGAGTTCCAAGTCGTCA 8735 Query 263057 ACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACC 263116 ||| | || ||||| | | || | || || ||| | | || | ||| Sbjct 8736 ACCCCTGGTTGCTCAAGGACCTCGTCGACATGGGTCTCTGGTCCGACAACATGAAGAACC 8795 Query 263117 GGCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGAT 263175 | ||||||| | || | ||||| | ||| | | | || | || |||| Sbjct 8796 GCATCATTGCAG-ACGGCGGCTCCATCCAGAACATCCCCAACA------TCCCCGCCGAC 8848 Query 263176 CTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATG 263232 ||||||| |||| ||||||||| |||||| | || | || ||||| | | ||| Sbjct 8849 ATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGC---ACCATCGTCCAGATG 8905 Query 263233 GCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGAC 263292 || |||||||||| ||| |||| || |||||| |||||| | || | ||| Sbjct 8906 GCCGCCGACCGCGGTGCCTTCATCGATCAATCCCAGTCCCTCAACATCCACATGAAGGAC 8965 Query 263293 CCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCG---TGGCGTCGCGGCCTC 263346 ||||| || | ||| |||| || |||||| | ||| ||| | ||||||| Sbjct 8966 CCGACAATGGGCAAGA---TCACATCCATGCAC---TTTGCCGGCTGGAAGCTCGGCCTC 9019 Query 263347 AAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTC 263406 ||||| || |||||||| || |||||| | |||| | | | || |||||||||||| Sbjct 9020 AAGACCGGAATGTACTACCTCCGCACCATGGCCGCATCGGCCCCTATCCAATTCACCGTC 9079 Query 263407 GATCAGG 263413 ||||||| Sbjct 9080 GATCAGG 9086 Score = 113 bits (124), Expect = 6e-19 Identities = 179/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || ||||| ||||| || || || | | ||| ||||| ||||| || | ||| Sbjct 7427 CCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCGAC 7486 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| ||||||||||| |||||| || || | ||||| Sbjct 7487 ATGAAGGAGGATAGCATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCA 7546 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || ||||| || ||| | || ||| | || || ||| | Sbjct 7547 AAGACTGCTGGAGGTATCGGATTGAATATCCACCGTATCCGTGCCACTGGTGCATACATT 7606 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| | || |||||| |||| || ||||| ||||| || ||| |||| Sbjct 7607 GCCGGTACCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACC 7666 Query 260165 GCGCGCTACGTCGACCA 260181 || | ||||| ||||| Sbjct 7667 GCAAGGTACGTTGACCA 7683 >seq519 Length=137297 Score = 113 bits (124), Expect = 6e-19 Identities = 203/294 (69%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869 ||||| || || ||| ||||| | ||||||| ||| ||| || || || || | Sbjct 90923 ACCTTCTCCGCCTCGATAATCTGGAGCAGGCGCTTCACGACTTGTGCATCCGTTAGCCTT 90864 Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929 || |||||| |||||||||||| |||||||| |||||||| | | ||| ||| Sbjct 90863 GCATAGCGCAAGATGGCACAACGTGACTGCAGGGGCTCGATGATCTTGTTTGACTGATTG 90804 Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT-CGACCGGAGGGCCTG 332988 || || | || || || || || | | | |||||||| |||| | ||||| || Sbjct 90803 CACGCGAATGCGAAGCGGGTGGTCGAAGAGTAGATCTCCATGGTGCGAC-GCAGGGCTTG 90745 Query 332989 TTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTG 333048 |||||| | | ||| | || ||||||||||||||| |||| | ||| |||||||| || Sbjct 90744 TTGGGCACCAGACGTCATGCTGTCGGCCTCGTCGAGAATGACAAGCTTTTGGCGCCCTTG 90685 Query 333049 CGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTC 333102 ||||| || | ||| |||| | ||||| ||||| |||||||| Sbjct 90684 GGGCAGCGTCACTTTCTTCTGGGCGAAGCCCTTGATACGGTTGCGTACGACGTC 90631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177638165402628