Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1081 214 3e-49
seq1037 134 2e-25
seq519 113 6e-19
>seq1081
Length=56605
Score = 214 bits (236), Expect = 3e-49
Identities = 359/507 (71%), Gaps = 12/507 (2%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||| || || || || ||||| || |||||| | || |
Sbjct 14900 GATCTGGCAGATGTAC-AAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATC 14842
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | ||| | ||||| ||| | | ||||| |||||| | ||||||
Sbjct 14841 TCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGCTACTTCATCT 14782
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||||| ||||| ||| |||||||| |||||| || || ||||||||| ||
Sbjct 14781 CCCACGTTCTCGC-TTTCTTCGCCGCGTCCGATGGAATTGTCAACGAGAACCTCCTCGAG 14723
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | | |||||||| | ||||| || || | || ||||| ||||| |||
Sbjct 14722 CGCTTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 14663
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
||||| ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | |
Sbjct 14662 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 14603
Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130
| | | | || ||||||| |||||||| || | || | | | ||| |||||
Sbjct 14602 GCTCA-ACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGTATCAAGAAGAAGGC 14544
Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGG-AGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189
||||||||| | | ||||||| |||| | || || || |||||| |||| |||||
Sbjct 14543 CGACTGGGCAGTTAGGTGGATC--CAAGATAAGGATTCTAC-CTTTGCTCAGCGTCTCGT 14487
Query 1456190 CGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248
| ||| || || |||||||| ||||| ||||| ||| ||| | |||| || |||||
Sbjct 14486 TGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCT 14427
Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||||||| ||||||||| | || ||
Sbjct 14426 CAAGAAGCGTGGCCTCATGGCTGGCCT 14400
Score = 95.1 bits (104), Expect = 2e-13
Identities = 171/245 (70%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590
|||||| ||| |||||| ||||||| | | ||| | || || ||||| ||||
Sbjct 14282 CGAGGCTGTCAGCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGG 14223
Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650
||||||||||| | | ||| || |||||||| || ||||||||| | |||||
Sbjct 14222 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGACAGGCTGCTGCTC 14165
Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710
| ||||| || ||||| ||||| | || ||||||| ||| | |||||| ||
Sbjct 14164 TCCCTCGGTAACG-AGAAGTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACAT 14106
Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGG 1456769
||| || | || ||||||||||| |||||| ||||| | ||| ||| ||| | ||
Sbjct 14105 CTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGG 14046
Query 1456770 CGTCA 1456774
||||
Sbjct 14045 TGTCA 14041
>seq1037
Length=26954
Score = 134 bits (148), Expect = 2e-25
Identities = 365/547 (67%), Gaps = 30/547 (5%)
Strand=Plus/Plus
Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGA-CAGCATGGCCTGCGCAACTCGTTGCT 262937
|||||||||||| | || ||| | | || | ||||| || | |||||||| ||||
Sbjct 8558 TGGGACTGGGACTCTCTCAAGGCC-CAGATCAAGCAGCACGGTGTCCGCAACTCCCTGCT 8616
Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997
||| || | ||||||||| ||| | || || |||||||| ||| || |||| |||||
Sbjct 8617 CGTCGCACCCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGA 8676
Query 262998 GGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCA 263056
| ||| ||| ||||||||| ||||||| || || | ||||| || || ||||
Sbjct 8677 GC-CATACACCTCGAACATCTACTCGCGCCGTGTCCTGGCCGGCGAGTTCCAAGTCGTCA 8735
Query 263057 ACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACC 263116
||| | || ||||| | | || | || || ||| | | || | |||
Sbjct 8736 ACCCCTGGTTGCTCAAGGACCTCGTCGACATGGGTCTCTGGTCCGACAACATGAAGAACC 8795
Query 263117 GGCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGAT 263175
| ||||||| | || | ||||| | ||| | | | || | || ||||
Sbjct 8796 GCATCATTGCAG-ACGGCGGCTCCATCCAGAACATCCCCAACA------TCCCCGCCGAC 8848
Query 263176 CTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATG 263232
||||||| |||| ||||||||| |||||| | || | || ||||| | | |||
Sbjct 8849 ATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGC---ACCATCGTCCAGATG 8905
Query 263233 GCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGAC 263292
|| |||||||||| ||| |||| || |||||| |||||| | || | |||
Sbjct 8906 GCCGCCGACCGCGGTGCCTTCATCGATCAATCCCAGTCCCTCAACATCCACATGAAGGAC 8965
Query 263293 CCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCG---TGGCGTCGCGGCCTC 263346
||||| || | ||| |||| || |||||| | ||| ||| | |||||||
Sbjct 8966 CCGACAATGGGCAAGA---TCACATCCATGCAC---TTTGCCGGCTGGAAGCTCGGCCTC 9019
Query 263347 AAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTC 263406
||||| || |||||||| || |||||| | |||| | | | || ||||||||||||
Sbjct 9020 AAGACCGGAATGTACTACCTCCGCACCATGGCCGCATCGGCCCCTATCCAATTCACCGTC 9079
Query 263407 GATCAGG 263413
|||||||
Sbjct 9080 GATCAGG 9086
Score = 113 bits (124), Expect = 6e-19
Identities = 179/257 (70%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
|| || ||||| ||||| || || || | | ||| ||||| ||||| || | |||
Sbjct 7427 CCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCGAC 7486
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| ||||||||||| |||||| || || | |||||
Sbjct 7487 ATGAAGGAGGATAGCATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCA 7546
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| | || || || ||||| || ||| | || ||| | || || ||| |
Sbjct 7547 AAGACTGCTGGAGGTATCGGATTGAATATCCACCGTATCCGTGCCACTGGTGCATACATT 7606
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || |||||||| | || |||||| |||| || ||||| ||||| || ||| ||||
Sbjct 7607 GCCGGTACCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACC 7666
Query 260165 GCGCGCTACGTCGACCA 260181
|| | ||||| |||||
Sbjct 7667 GCAAGGTACGTTGACCA 7683
>seq519
Length=137297
Score = 113 bits (124), Expect = 6e-19
Identities = 203/294 (69%), Gaps = 2/294 (1%)
Strand=Plus/Minus
Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869
||||| || || ||| ||||| | ||||||| ||| ||| || || || || |
Sbjct 90923 ACCTTCTCCGCCTCGATAATCTGGAGCAGGCGCTTCACGACTTGTGCATCCGTTAGCCTT 90864
Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929
|| |||||| |||||||||||| |||||||| |||||||| | | ||| |||
Sbjct 90863 GCATAGCGCAAGATGGCACAACGTGACTGCAGGGGCTCGATGATCTTGTTTGACTGATTG 90804
Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT-CGACCGGAGGGCCTG 332988
|| || | || || || || || | | | |||||||| |||| | ||||| ||
Sbjct 90803 CACGCGAATGCGAAGCGGGTGGTCGAAGAGTAGATCTCCATGGTGCGAC-GCAGGGCTTG 90745
Query 332989 TTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTG 333048
|||||| | | ||| | || ||||||||||||||| |||| | ||| |||||||| ||
Sbjct 90744 TTGGGCACCAGACGTCATGCTGTCGGCCTCGTCGAGAATGACAAGCTTTTGGCGCCCTTG 90685
Query 333049 CGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTC 333102
||||| || | ||| |||| | ||||| ||||| ||||||||
Sbjct 90684 GGGCAGCGTCACTTTCTTCTGGGCGAAGCCCTTGATACGGTTGCGTACGACGTC 90631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177638165402628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |