Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1081 120 4e-22
>seq1081
Length=56605
Score = 120 bits (132), Expect = 4e-22
Identities = 366/563 (65%), Gaps = 16/563 (3%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||||||||| || || |||||||| | || | ||||| || || || ||
Sbjct 14342 GCAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 14401
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|||| ||| || |||||||| |||||||| || |||| || || || || || |||||
Sbjct 14402 GCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAA 14461
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TG 39792
||| || || || || || || ||||| || | || | | | | ||| ||| ||
Sbjct 14462 GATACCCTCGACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTG 14521
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | |||||| || || |||||||| | |||||| || || || || |||||
Sbjct 14522 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCGATGGCATT 14581
Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911
||||| | |||| || | | || || | ||||| || || | || ||
Sbjct 14582 GAAGAGGT-ATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 14640
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
| || | || ||||| || ||| || || || ||||| || || | ||||| | |
Sbjct 14641 TCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 14700
Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031
| || ||||| | || | || | || || || || |||||||| ||||
Sbjct 14701 TCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCATCGGACGCGG 14760
Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTA 40084
| || || || | || || || || || ||||| |||| | ||
Sbjct 14761 CGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATC----GTCATTGAGGCGGTTG 14816
Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144
|||||||| | | || || || | ||| | || || |||||||| || || || ||
Sbjct 14817 TTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGATGCTTCC 14876
Query 40145 GCCTTTTTGTACATGTTCCATAT 40167
||||| |||||||| | ||| ||
Sbjct 14877 GCCTTCTTGTACATCTGCCAGAT 14899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686893396070160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |