Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq367 111 1e-19 >seq367 Length=89930 Score = 111 bits (122), Expect = 1e-19 Identities = 254/382 (66%), Gaps = 13/382 (3%) Strand=Plus/Minus Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500 ||||||||||| |||| ||||||| ||| |||||||| ||||| ||| | ||| | Sbjct 77656 AATGGTCCTGAGGTCTTGAATAAATTTGTCGGTCAATCAGAAGAGAATATCCGAAACCTC 77597 Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCA--AAAGTTCTTTGCACATTA 19558 || ||||| || || ||||| | || | |||| | | ||| | ||||||| Sbjct 77596 TTCGCTGATGCCGAGAAAGAATACAA--GGAGAGGGGTGATGAGAGTGAGCTTCACATTA 77539 Query 19559 TAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTA---------A 19609 | || | || ||| | || || | || ||||| ||||| ||||||| | Sbjct 77538 TCATTTTCGACGAACTTGATGCTGTATGCAAGCAGAGAGGCTCTGGTGGCGGAGGCGGCA 77479 Query 19610 ATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAAC 19669 ||| || |||| ||||||||| || || || | ||| | || ||||| |||| | Sbjct 77478 CTGGTGTTGGCGACAGTGTTGTCAACCAGCTGCTTGCCAAACTTGATGGTGTGGACCAGC 77419 Query 19670 TGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTAT 19729 | ||||||||| | | ||||| ||||| || || |||| | || || |||| | Sbjct 77418 TCAATAATATTATCCTGATTGGTATGACCAACCGAATGGATATGATTGATGACGCCCTGC 77359 Query 19730 TACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTG 19789 | || || || || ||||| | | || || ||| | |||||||||||| || | Sbjct 77358 TTCGTCCTGGACGTCTGGAAGTTCACATGGAGATTTCCCTACCCGATGAATCCGGCAGAC 77299 Query 19790 TGGAAATTTTAAACATACATAC 19811 ||| ||| | ||||| || || Sbjct 77298 AGGATATTCTCAACATCCACAC 77277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397447309872970