Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1037 242 5e-59 seq1081 136 5e-27 seq730 84.2 3e-11 >seq1037 Length=26954 Score = 242 bits (268), Expect = 5e-59 Identities = 1157/1809 (64%), Gaps = 41/1809 (2%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 ||||| |||||||| ||||||||||| || | ||||| || | ||||| || | | Sbjct 9042 CGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGGATGTG 8983 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGA 110480 | |||| ||| || || | |||| || ||| | ||| || ||| || |||| Sbjct 8982 ATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGA--TTGATCGATGA 8925 Query 110481 AGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTGT 110538 || || || | || ||||| | | || | | | | | || ||||| || || Sbjct 8924 AGGCACCGCGGTCGGCGGCCATCTGGACGA--TGGTGCGCTGGGAGATCTCCCAGACGGT 8867 Query 110539 GCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGC 110598 ||||| |||||| || | ||||| | | ||| ||||||||||| || || | Sbjct 8866 CTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGCC-GT 8808 Query 110599 CTTCACC-ATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGA 110657 || || ||| | | |||||| | | |||||||||||| || | |||||| |||| Sbjct 8807 CTGCAATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACGAGGTCCTTGA 8748 Query 110658 ----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATG 110713 | ||| | ||||| | ||||| || || ||| | | | ||||||| Sbjct 8747 GCAACCAGGGG----TTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATG 8692 Query 110714 TTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 110773 || | |||||||| || ||||| || || || | ||| || | ||||||||| || Sbjct 8691 TTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTG 8632 Query 110774 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGA 110833 ||||| ||||| | | || ||| || | ||| | || |||||| | |||||||| Sbjct 8631 GGCATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGA 8572 Query 110834 ACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCC 110892 |||||||| | | | | || | || |||||||||| | || ||| | || Sbjct 8571 GAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATGTCGTATTGGAGCTCACC 8513 Query 110893 TTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACA 110952 | |||| | || || ||||| |||| || || | || || | |||| || Sbjct 8512 CTTGGACACTGGGGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCAC 8453 Query 110953 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 111012 | || || || |||| || ||||| |||||||| | | || | |||||| Sbjct 8452 GGAGGCAGTCAAGGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGC 8393 Query 111013 TTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 111072 || ||||| || | |||| | ||| |||| || ||||| || ||||| Sbjct 8392 CTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACC 8333 Query 111073 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 111132 | ||| || ||||| || | ||| || || | ||||| || | || Sbjct 8332 AACGGCAACTGGCCTGTGACGGAAATTGCTGCGTCTGGCCTCCGGGACGGGGTAGTAGTT 8273 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192 |||||||| ||| | || ||| ||||| || ||||| || ||||| || | Sbjct 8272 GACGTCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAGCTTCTG 8213 Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 | || | |||| | | | ||||| | || ||||| | |||||||| || Sbjct 8212 GAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGCAAGGGATGCCAAGTT 8153 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 || || || |||||| | | |||||| | ||| ||||| || | |||||| || Sbjct 8152 ACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGTTGGAGCT 8093 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 || || || | ||||| ||||| ||||| |||||| ||||||||||| | ||| Sbjct 8092 GCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACAACAT 8033 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTG 111431 | | || | || ||||| ||||| || | |||||| | | ||||| | || | | || Sbjct 8032 GAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTT 7973 Query 111432 G-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 111489 | || | ||| ||| | |||||| |||||| |||||| || || ||||| Sbjct 7972 GATAGTCTTGCGA---CCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCGAACTC 7916 Query 111490 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGAC 111548 || || | || | | || || || || || || || | || | ||| | | Sbjct 7915 ATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTCCAGTCGC 7857 Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608 | | ||| || ||||||||||| || || |||||||| || | | || | || | Sbjct 7856 CGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAACAAGTCAC 7797 Query 111609 TA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 ||| || | || || | || ||||| || || || |||||||| | || |||| Sbjct 7796 GGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCC 7738 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 111723 |||||||||||||||| |||| |||| || || | | | ||| | |||| | Sbjct 7737 GCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCC-ACCTTGGTC 7679 Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783 || || | || ||| ||| || ||||| ||||| || | ||| || | || | || Sbjct 7678 AACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAGTTTCC 7619 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 || || || ||| | | |||| | | | ||||| | || || ||||| Sbjct 7618 GTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCGATACC 7559 Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903 ||||| ||||||||| ||||| | | || || |||||||||| | || Sbjct 7558 TCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAATGCT 7499 Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCAT 111962 |||||||| || ||| | |||||| |||| ||| || || |||||||||||||| Sbjct 7498 ATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTG-GGCCTGTGGTGTACCAGCAT 7440 Query 111963 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTATGTCTC 112020 ||||||| ||||| | ||||| |||| || |||| ||||| || ||||||||| Sbjct 7439 TGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATGTCTC 7382 Query 112021 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTG 112080 | ||||| || || ||||| ||||| | || || ||||| | ||||| ||| Sbjct 7381 GATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCATGTGCTG 7322 Query 112081 TGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAG 112140 ||| | || | ||||||| || || |||| ||| ||| ||||| |||| Sbjct 7321 TGGCCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGGTAGGATCGCTCCAGGGTCTTGAA 7262 Query 112141 ACCAAAGTA 112149 || ||||| Sbjct 7261 GCCGAAGTA 7253 >seq1081 Length=56605 Score = 136 bits (150), Expect = 5e-27 Identities = 339/509 (67%), Gaps = 7/509 (1%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||||||||||||||| ||||| || || || || |||||| || || | |||||| || Sbjct 14357 GTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 14416 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| ||| Sbjct 14417 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACAGC 14476 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || |||| || || | || |||| | ||| | | | ||| | | ||| Sbjct 14477 AGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTGGATCCACCTAACTGC 14536 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||| | |||||||||| ||||| || | || | |||||| | || | | | Sbjct 14537 CCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCG 14596 Query 122910 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 122969 || || ||||| |||||| |||| || | || ||||| ||| | |||| | Sbjct 14597 TTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 14656 Query 122970 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCG 123028 || || || | ||| | ||||||| |||| ||||| ||||| ||||| | | Sbjct 14657 CTCGATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-GCTG 14714 Query 123029 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087 | || | | || ||||| ||||||||||||||| | || ||||| || || Sbjct 14715 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCATCGGACGCGGCGAAGAAAGCGAGA 14774 Query 123088 ATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCT 123144 | || ||||| | |||| ||||| | || | |||||||||| ||| || Sbjct 14775 ACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCC 14834 Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | ||||| || || || ||||| Sbjct 14835 TTGGAGAGATCAATCTCCTCTGCTGTCCA 14863 >seq730 Length=5626 Score = 84.2 bits (92), Expect = 3e-11 Identities = 183/267 (69%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCA 11743 ||||| ||||| || | ||||| || || || || | ||||| | || || || || Sbjct 780 AAGAGCTCGCGGACGCGCTTGGCGCCGACGCCGACGTAGATCTCATCGAA-TTCGCTGCC 838 Query 11744 GAGCACTG--GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 11801 | || || || ||| ||||| || || || || | || || ||||||||||||| Sbjct 839 GGACA-TGAAGAAGAAAGGGACGCCTGCCTCGCCGGCTACTGCGCGAGCGAGGAGGGTCT 897 Query 11802 TTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCC 11859 |||| ||||| || ||| |||| || | || ||||| |||| |||| || Sbjct 898 TTCCGGTACCGGGAGGACCGACGAGGAGAACACCCTTGGGGAGCTTGCCACCGAGAGTCG 957 Query 11860 AAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGC 11919 | ||| | || |||| | |||||| |||||||||| ||| | ||| || || || || | Sbjct 958 AGAAT-TTTC-CGGGGTTCTTGAGGAAATCCACAAGCTCCTGAAGCTCCTCCTTCGCTTC 1015 Query 11920 GTCAATCCCCTCAACATCACTGAAGCG 11946 ||| || | ||||||| |||||| Sbjct 1016 GTCGCAGCCGTGAACATCAGAGAAGCG 1042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628017916382400