Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1037 251 9e-62 seq1081 188 9e-43 >seq1037 Length=26954 Score = 251 bits (278), Expect = 9e-62 Identities = 1117/1745 (64%), Gaps = 59/1745 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| || |||||||| || |||||||| | | ||||| || | Sbjct 9042 CGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGGATGTG 8983 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | || || | |||| || ||| | |||||||||||||||||| Sbjct 8982 ATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAG 8923 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTC 118013 || || || || ||||| | | | | | | || | || ||||| || ||| Sbjct 8922 GCACCGCGGTCGGCGGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 8866 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 |||||||| ||| || || | ||||| | ||| || |||||||| || || | Sbjct 8865 TTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGCCGTCT 8806 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT----C 118129 | ||| | | |||||| | | ||||||||||| || | ||| |||| | Sbjct 8805 GCAATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACGAGGTCCTTGAGC 8746 Query 118130 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 118189 || || | ||||| || ||||| || || ||| || | | ||||| || Sbjct 8745 AACCAGGGG----TTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTT 8690 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 | ||||||||||| |||||||| ||| || | ||| |||| |||||||| ||||| Sbjct 8689 CGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGG 8630 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309 ||||||||| | ||| ||| ||| |||| ||| | | | | || | ||||||||| Sbjct 8629 CATGGGTGCGACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGA 8570 Query 118310 GTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 118366 ||||||||| | || | || | || |||||| || | ||||| ||| Sbjct 8569 GTCCCAGTCCCACAGGTCGGTAGGAGTAACGCC---CCACATGTCGTATTGGAGCTCACC 8513 Query 118367 TTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---C 118423 | |||| |||| |||||||| | ||||| |||| ||| | || || |||| | | Sbjct 8512 CTTGGACACTGGGGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCAC 8453 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 |||| || | ||| |||| || || || ||||| || | | || | ||| Sbjct 8452 GGAG---GCAGTCAAGGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACTT 8396 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 ||||||| ||||| || | || ||| | ||| |||| || ||||| ||||| Sbjct 8395 GGCCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGAC 8336 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATA 118600 ||| | | ||| ||| | || | | ||| | || || |||| ||||| || Sbjct 8335 ACCAACGGCAACTGGCCTGTGACGGAAATT---GCTGCGTCTGGCCTCCGGGACGGGGTA 8279 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 | || || || | | | || | || ||| ||||||| ||||| || ||||| Sbjct 8278 GTAGTTGACGTCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAG 8219 Query 118661 CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGC 118720 ||| | | | || | ||| | | | ||||| | || ||||| | || || Sbjct 8218 CTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGCAAGGGATGC 8159 Query 118721 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTT 118780 || |||||||| | |||||| ||| |||||| | ||| || ||||||| ||| Sbjct 8158 CAAGTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGTT 8099 Query 118781 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 118840 || || ||||| || | |||||| || || ||| ||| || ||||||||||| Sbjct 8098 GGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTA 8039 Query 118841 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGG 118899 | |||| | || | || ||||| || || |||| |||||| | | ||| | | || | Sbjct 8038 CAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTG 7979 Query 118900 CAGCTGGCACAGTGGCGTTGGCTCGC---CCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956 || | | ||| ||| | | ||||| | |||||| |||||| || | Sbjct 7978 GGCCTTG-ATAGT---CTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCT 7923 Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGAC 119015 | ||||| || || | |||| | || || || || | ||||| | ||| | | Sbjct 7922 CGAACTCATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTC 7864 Query 119016 CATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG 119075 || | || || ||| || |||||||||||||| || || |||||||| || |||| Sbjct 7863 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAAC 7804 Query 119076 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 119135 | || || || |||| || | || || || | ||| |||| || || | | Sbjct 7803 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 7744 Query 119136 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCA 119189 | |||||||||||| || || | ||| | |||| | || | | || ||| Sbjct 7743 ACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACC---AGGGCGCTTGTTGCCA 7687 Query 119190 GCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCG 119249 | |||| || ||||| || ||| ||| || || || ||||| || | || || | Sbjct 7686 CCTTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTC 7627 Query 119250 GATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATA 119309 || | || || || || ||| | | |||| | || | |||||| | || Sbjct 7626 GAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAAT 7567 Query 119310 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCA 119369 || ||||| || || ||||||||| || || | |||| || | ||||| || Sbjct 7566 CCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCC 7507 Query 119370 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGT 119428 || || || |||| | ||| | ||||||| ||||| || |||||| ||||| Sbjct 7506 TCAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTG-GGCCTGTGGTGT 7448 Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTTGTCG 119486 |||||| |||||||| ||||| | ||||| |||| || |||| ||||| || | Sbjct 7447 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTG 7390 Query 119487 TAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAA 119545 || ||||| | | | | ||| || || |||||||| || | || || ||||||| Sbjct 7389 TATGTCTCGATTGTCTTC-TCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAAT 7331 Query 119546 CATGT 119550 ||||| Sbjct 7330 CATGT 7326 >seq1081 Length=56605 Score = 188 bits (208), Expect = 9e-43 Identities = 537/813 (66%), Gaps = 17/813 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| | || ||||||||||||||||| ||||| || ||| | ||| |||||||| Sbjct 14058 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCATG 14117 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || |||||||| | || || | | | || | | | | || || | Sbjct 14118 AAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGC-AGCAGCCT 14176 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||||||||| | |||| | || |||||| |||| || ||| Sbjct 14177 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 14236 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || | |||| | | ||| ||| ||||| || | || | | || Sbjct 14237 GGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGACAGCCTCGGTAATGACGTCTTG 14296 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCT 130025 | || || | ||| || | | | || || |||||| ||| || || Sbjct 14297 GACGGCCTGCTTGCTTGGGCGGTGTCT-AAGGTGGGAGAAGAGGAGGCAGGCGAAGTCGG 14355 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 |||||||||||| |||||||||||||| || ||||||||| ||| || | |||||| | Sbjct 14356 TGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGC 14415 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| | ||||||||| | || ||||| ||||||||||| ||||| ||| Sbjct 14416 CACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACAG 14475 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCA 130202 ||||| |||| |||||||| |||||||| || | |||| | |||| | | Sbjct 14476 CAGCGAAGGCAACGAGACGCTGAGCAAAGG---TAGAATCCTTATCTTGGATCCACCTAA 14532 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 ||||| | ||||| |||| |||||| || | ||||| ||| || | ||||| | Sbjct 14533 CTGCCCAGTCGGCCTTCTTCTTGATACAAGGAATGGTCTCGATGGCATTGAAGAGGTATG 14592 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 | || | | || |||||||| | || ||||| || ||||| ||| | || | Sbjct 14593 TGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAA 14652 Query 130323 CCATTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | || || ||| || || ||||||| |||| ||||| ||||| ||||| Sbjct 14653 TGTTCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC- 14710 Query 130382 TCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 130440 |||| || | | || ||||| ||||||||||||||| | || || || || Sbjct 14711 GCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCATCGGACGCGGCGAAGAAAGC 14770 Query 130441 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 130497 || | | ||||| | | |||| || || | || | |||||||||| ||| Sbjct 14771 GAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAG 14830 Query 130498 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||| |||||||| | |||||| || ||||| Sbjct 14831 GTCCTTGGAGAGATCAATCTCCTCTGCTGTCCA 14863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618421331590640