Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1037 268 1e-66 seq1081 141 1e-28 >seq1037 Length=26954 Score = 268 bits (296), Expect = 1e-66 Identities = 911/1394 (65%), Gaps = 33/1394 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| || || | || ||||| || || || ||||| Sbjct 7319 CCACAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGTGAGGATATTGAGAAGACA 7378 Query 104282 TTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||||||| || ||||| |||| || |||| ||||| | ||||| |||| Sbjct 7379 ATCGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCTTCCCCAACACTCT 7436 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||||||||||||| |||| |||| |||||| | ||| || ||||||| Sbjct 7437 TCAATGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCGACATGAAGGAGG 7496 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 | || | |||||||||| || || | | ||||| ||||||||| |||| Sbjct 7497 ATAGCATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTG 7556 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | ||||| || || | ||||| | | | |||| | | ||| || || | Sbjct 7557 GAGGTATCGGATTGAATATCCACCGTATCCGTGCCACTGGTGCATACATTGCCGGTACCA 7616 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || | || | || ||| | || ||||| ||||| || ||| ||| || | || | Sbjct 7617 ACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGTACG 7676 Query 104580 TAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 | | |||| ||| | | | | || || |||| |||| |||||||||||||| Sbjct 7677 TTGACCAAGGTGG-CAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGCAC 7735 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 |||||| || | |||||||| || ||| | ||||| || | ||||| | || | Sbjct 7736 GCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTGCC 7795 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || || | |||| ||||||||||||||| ||||||||||||||| | || ||| ||| Sbjct 7796 CGTGACTTGTTCTACGCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAGAAC 7855 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 ||| | ||| | ||| | || || || || || ||||| | | |||| || || Sbjct 7856 GGCGACTGGACCCTCATGTGCCCCAACGAATGC-CCTGGATTGGCAGATGTTTACGGCGA 7914 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTG 104872 ||||| || || || ||| |||||| | || ||| || | | || ||| | Sbjct 7915 TGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGG-GTC-GCAAGACTAT- 7971 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | || | || | | ||| | | |||||| ||||||| || ||||| || | || | Sbjct 7972 CAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTTT 8031 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||| | ||||| || ||||| |||| ||||| || || ||||| | ||| ||| Sbjct 8032 CATGTTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCG 8091 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || ||||| || || ||||| || | || | | | | ||||||| || ||||| Sbjct 8092 CAGCTCCAACCTGTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAGGTTGCCGTGTG 8151 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTGAT 105109 |||| | ||||| | || || || | ||||| || || | ||| | |||| || Sbjct 8152 TAACTTGGCATCCCTTGCCCTGCCGACATATGTTGA--CATGGCCAACGGCACATACGAC 8209 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | || || ||||| || || | ||| ||| ||| | |||| | ||||| Sbjct 8210 TTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTCAAGAACTTGAACAAGATCATTGAC 8269 Query 105170 AGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 || | |||||||| ||| | || | ||| | | ||| | ||| || Sbjct 8270 GTCAACTACTACCCCGTCCCGGAGGCCAGACGCA---GCAATTTCCGTCACAGGCCAGTT 8326 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286 | | ||||| |||||||| || |||| |||| | | |||| | || ||||| Sbjct 8327 GCCGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCCTTCGATTCT 8386 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA- 105345 ||| || ||| |||| | | || ||||||||||| || |||| || ||||| Sbjct 8387 CCCGAGGCCAAGTTCCTCAACTCCCAGATCTTTGAGACCATCTACCACGGTGC-CTTGAC 8445 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || ||| |||| || || | || |||| || |||| ||||| || |||| Sbjct 8446 TGCCTCCGTGGAGCTGGCCCAGATTCACGGCACATACGAGACCTACGAGGGATCCCCAGT 8505 Query 105406 TTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGAC 105463 || |||||| | ||| |||| || ||||||| || | || | | | | ||| Sbjct 8506 GTC-CAAGGGTGAGCTCCAATACGACATGTGGG-GCGTTACTCCTACCGACCTGTGGGAC 8563 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 ||||| ||||||||| | |||||| || | ||| | || ||| || ||| | || Sbjct 8564 TGGGACTCTCTCAAGGCCCAGATCAAGCAGCACGGTGTCCGCAACTCCCTGCTCGTCGCA 8623 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||| || ||||||||| | || ||| | || || || ||||| || || ||| Sbjct 8624 CCCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCATAC 8683 Query 105584 ACGACGAACATCTA 105597 || |||||||||| Sbjct 8684 ACCTCGAACATCTA 8697 >seq1081 Length=56605 Score = 141 bits (156), Expect = 1e-28 Identities = 345/513 (67%), Gaps = 15/513 (3%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 ||||| || || ||| | |||||||| ||||| | |||| ||||| | | | ||| Sbjct 14863 TGGACAGCAGAGGAGATTGATCTCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAAT 14804 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || |||| | ||||| || | || || ||||| || | |||||||||||| Sbjct 14803 GACGATGAGCGCTACTTCATCTCCCACGTTCTCGCTTTCTTCGCCGCGTCCGATGGAATT 14744 Query 94558 GTTTTTGAGAATATCAATAACAACTTT-GCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 94615 || ||||| || | ||| || | ||||| || |||| | ||||| | | Sbjct 14743 GTCAACGAGAACCTCCTCGAGCGCTTCAGCAGC-GAGGTCCAGATCC-CAGAAGCCCGCT 14686 Query 94616 CCTTCTATGCGTATCAGTGTCATAAT-GAAATGGTGCATGGGGAGACATACAGTAAACTC 94674 |||||| | || || |||| || || | | || | ||||||||| ||| Sbjct 14685 GCTTCTACG-GTTTCCAAATCATGATCGAGAACATTCACGCCGAGACATACTCCCTCCTC 14627 Query 94675 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 94734 || |||| || || ||||| ||| | | | ||||| | |||||| | || Sbjct 14626 ATCGACACATACATCAAGGAGCAGGCTCAACGCACATACCTCTTCAATGCCATCGAGACC 14567 Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCG 94791 |||| ||||| | ||||| || || ||||| | | |||| | |||| | || Sbjct 14566 ATTCCTTGTATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTC- 14508 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 | |||||||| |||| ||| | || || || ||| ||||||||||||||||| || Sbjct 14507 --TACCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGC 14450 Query 94852 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 |||||| | | |||| |||||||||||||| || |||||| | || || |||||| Sbjct 14449 TCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCG 14390 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| ||||| ||||| ||||| |||||| Sbjct 14389 AACGAGCTCATCTCCCGTGATGAGGGTCTCCAC 14357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583247720376560