Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq528 149 2e-30
seq477 118 3e-21
seq724 84.2 7e-11
>seq528
Length=17027
Score = 149 bits (164), Expect = 2e-30
Identities = 174/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| | ||| || || ||||| || ||||| || |
Sbjct 15538 TTTGCATACCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGT 15479
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || || || || || || || || || || || || ||||| |
Sbjct 15478 AGTCCGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGT 15419
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| |||||||| || || || |||||||| || | || || |||||||| | ||| ||||
Sbjct 15418 CCGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCGGATG 15359
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || ||||| |||| ||||| || || || || || ||||||||||||||
Sbjct 15358 ATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 15304
Score = 138 bits (152), Expect = 3e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | ||||||||||| || |||||||| || || || || || ||
Sbjct 15762 CATACCACCCCGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTC 15703
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || ||||| || || || || || || || || || || ||||| || ||
Sbjct 15702 AGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGG 15643
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || ||||| || || |||| || || ||||| || | ||| || | ||
Sbjct 15642 TGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTC 15583
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || |||| |||||||||||| || || || || || || |||||
Sbjct 15582 GACTTCTAGCGTAATTGTCTTTCCGGTGAGGGTCTTAACGAAGATTTGCAT 15532
Score = 111 bits (122), Expect = 5e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| ||||| || ||| || || || ||||| || | || | |||||| || |
Sbjct 15966 CAAG-TGAAGCGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGCGTCCTCCCATCCTCGA 15908
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
| || || ||||||||||| | ||| ||||| || || || || || || ||||||||||
Sbjct 15907 GCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAA 15848
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || | || || || ||||| | || || | ||||| || || |||| |||||||
Sbjct 15847 TCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTC 15788
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||| | || || || |||||||||||
Sbjct 15787 CGGTCAAGGTCTTGACGAAAATCTGCAT 15760
Score = 93.3 bits (102), Expect = 1e-13
Identities = 147/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | || || | || || || ||||| || || || || || ||
Sbjct 15078 CATACCACCGCGCAGACGAAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 15019
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || |||||||| || || || ||||| ||||||||||| || ||
Sbjct 15018 GGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGG 14959
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|||||||| || || || || || || ||| || || || || || | ||| || | |
Sbjct 14958 GGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTAACGTTGTCGATGGTATCGGACGACT 14900
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || ||||| || | ||||| || ||
Sbjct 14899 CGACCTCAAGGGTGATGGTCTTGCCAGT 14872
>seq477
Length=84057
Score = 118 bits (130), Expect = 3e-21
Identities = 218/320 (68%), Gaps = 0/320 (0%)
Strand=Plus/Plus
Query 378127 CCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTCATATCA 378186
||||| ||||| || |||||||||||| | | | | ||| || || || ||||
Sbjct 76421 CCATCCTCTCCGTAGATGAATTGAACAATGTCACCAAGAGAGTTCCTGACGGTTCCATCA 76480
Query 378187 TATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGA 378246
|| | ||||| | |||||| || || || | || || || ||| ||||||||||
Sbjct 76481 TACTTGACCATGACATCTTCCAAAGCCTTGACGAGACGACGTTGAATGTAACCAGTTTCG 76540
Query 378247 CTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAAT 378306
||| || || || |||||||| | ||| |||||||| |||| ||||||||||| ||
Sbjct 76541 GCAGTCTTGACAGCGGTATCAATGAGACCCTCACGACCAGCCATGGCATGGAAGAAGAAC 76600
Query 378307 TCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAA 378366
|||| ||||| || || | | | || |||||| ||| || | | | || ||
Sbjct 76601 TCAGATGGAGTGAGACCTCTCAGGTACGAGTTCTCAACAAAGCCACGAGACTCGGGAGAG 76660
Query 378367 TCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTT 378426
| ||||| ||||| |||| || | || || | || || || | ||||| || ||
Sbjct 76661 TAATCATCCTTTGTGAAATGTGGCAGGGTGCGGTACTTGAATCCGAAAGGAATACGCTTA 76720
Query 378427 CCATCAACATTCTGTTGACC 378446
|| |||||| ||| || ||
Sbjct 76721 CCCTCAACAGACTGCTGTCC 76740
Score = 84.2 bits (92), Expect = 7e-11
Identities = 101/137 (74%), Gaps = 3/137 (2%)
Strand=Plus/Plus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| ||||||||| |||| || ||| || || | ||||| ||||| |||||||||||
Sbjct 75731 CGCGGCACACCAAGTGTGACGTTC---TTGGACGACACACCGGCAAAATGGAAAGTATTG 75787
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | || |||| |||||||| || || || || |||| || || ||||| ||
Sbjct 75788 AGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGAATACCGACCATCTCG 75847
Query 377578 CCAGGATTGACAATAGC 377594
|| || ||||| | |||
Sbjct 75848 CCGGGGTTGACCAGAGC 75864
>seq724
Length=143787
Score = 84.2 bits (92), Expect = 7e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| || || || || || || | || || ||||| || || || || |||||||||||
Sbjct 12896 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 12837
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
|| || ||||| || ||||||||||| || || || || || || | || ||||| ||
Sbjct 12836 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 12777
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| | ||| || | || || ||||| || | ||||| || ||
Sbjct 12776 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 12733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515219570930582
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |