Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1037 277 2e-69 seq528 188 8e-43 seq790 167 3e-36 seq724 140 4e-28 seq1081 107 2e-18 >seq1037 Length=26954 Score = 277 bits (306), Expect = 2e-69 Identities = 931/1426 (65%), Gaps = 40/1426 (3%) Strand=Plus/Minus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415 ||||| || || ||| || ||| || | ||| | ||||| ||||| || |||| Sbjct 8724 AACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCG 8665 Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475 ||| ||||||||||| | ||| || || ||||| || |||| | ||| || || Sbjct 8664 TTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCGACGAGCAGGGAGTTG 8605 Query 80476 CGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTGA---CCAAAAATC---AACC 80526 || | ||||||| |||||| | ||| | | | || | ||| | || | Sbjct 8604 CGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGA 8545 Query 80527 CCAACGCTGTGACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCG 80586 ||||| |||||||||||| || | |||| ||| | || || ||| || Sbjct 8544 GTAACGC------CCCACATGTCGTATTGGAGCTCACCCTTGGACACTGGGGATCCCTCG 8491 Query 80587 AACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCA-TAAGGGCCGCGTG 80645 | |||||||| | ||| | ||| ||||||||| |||| || | | ||| |||| Sbjct 8490 TAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTC-CACGGAGGCAGTCAAGGCACCGTG 8432 Query 80646 ATAAATGCACTCAAAGACGCCCTTGTTCAC-ACCGCGCGCCTGTGGGTCGTCGAACGACA 80704 || ||| |||||||| ||| | | | | |||| || ||||| | | Sbjct 8431 GTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACTTG-GCCTCGGGAGAATCGAAGGGAA 8373 Query 80705 AGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGC 80764 || | || ||| | ||||| || ||||| || || | ||| | || | ||| | Sbjct 8372 GGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCAACGGCAACTGGCCTGTGAC 8313 Query 80765 GCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCA 80824 | || || ||||||||| | ||||| |||| || |||| ||||| Sbjct 8312 GGAAATTGCTGCGTCTGGCCTCCGGGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCA 8253 Query 80825 GGTTGCGTGT-AACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT-TG--GTTC 80880 ||| | || ||||||| |||| || || ||||| ||||| |||||| || || ||| Sbjct 8252 AGTT-CTTGACAACAACCTGTGTGACCTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTG 8194 Query 80881 CCCTTCACAA---ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCA 80937 || | ||| ||| ||| ||| ||||| |||| || |||||||| ||||| || Sbjct 8193 GCCATGTCAACATATGTCGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCT 8134 Query 80938 GCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTT 80997 | | | ||||||| || || ||||||| || || || ||||| ||||| Sbjct 8133 GGGGCAGAGTACTCGACAATCTCTGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTC 8074 Query 80998 TTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCG 81057 |||||||| |||| |||||| || |||||||| ||||| | ||| | || ||||| Sbjct 8073 TTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCA 8014 Query 81058 ACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTG 81117 ||| |||| ||| |||| || ||||| || | ||||||| |||||| || Sbjct 8013 GTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTGCGACCCTTA 7954 Query 81118 CCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAG 81176 || || | | || |||| ||| | ||||||| | |||| || || | | Sbjct 7953 CCCTCCTTCTCGTAGCCCTCGTAGAGCGCC-TCGAACTCATCGCCGTAAACATCTGCCAA 7895 Query 81177 GTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCAT 81236 | ||||| ||||| |||||||| ||| ||||||| || ||||| ||| |||||| Sbjct 7894 TCCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCAT 7835 Query 81237 GAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACC 81296 ||| || || |||||||| ||| ||||| ||| ||| || | ||||| | || Sbjct 7834 GAAGAGATCCGGAATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCC 7775 Query 81297 CTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACAC 81356 ||||| | ||| || || || || | || ||||| ||||||||||| | || | Sbjct 7774 GTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCAACGTAGAT 7715 Query 81357 GGCGATCGACCCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAA 81413 ||||| | || ||| | ||||| |||| ||||| | || || ||| || Sbjct 7714 GGCGAAAGCACCAGGGCGCTTGTTGCCACCTTGGTCAACGTACCTTGCGGTGTTGTTGAA 7655 Query 81414 TACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCC 81473 || || | |||||||| || || | || | ||||| ||||| | || | || Sbjct 7654 CACGCGGAGCATAGGGACAATGCCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACC 7595 Query 81474 CTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGA 81531 |||| || | | || ||| || ||||| || || | |||||| ||| Sbjct 7594 AGTGGCACGGATACGGTGGATATTCAAT--CCGATACCTCCAGCAGTCTTTGAGATCATG 7537 Query 81532 GCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAG 81591 ||||| || | || ||||| || ||||| |||||||| | |||||||| | |||| Sbjct 7536 GCACAAGTCTTGAGTGTGTCATAGATACCCTCAATGCTATCCTCCTTCATGTCGACCAAG 7477 Query 81592 AAACAGCTTGACATCTGAGGGCTTTT-TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTG 81650 || ||| |||| ||| || || | || || |||||||| |||||||||| ||||| Sbjct 7476 AAGCAGGACGACAGCTG-GGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTG 7418 Query 81651 AATGAAATAACGGTTTGACATCAGGTCATAGGTTTCC-TTGACGCGTGGAATATCGTCAC 81709 |||| || | ||||| |||| || || || ||| | | |||||| |||| Sbjct 7417 TGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTC-AATATCCTCAC 7359 Query 81710 CGTGAATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 ||||||| || | || |||||||||| ||||| ||| ||| |||| Sbjct 7358 CGTGAATGCCCACCGCAACACGCATAATCATGTGCTGTGGCCTCTC 7313 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || || |||||||| || ||||||||||| |||||||||| | |||||| || Sbjct 9045 GTGCGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGGAT 8986 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | ||| |||| || |||| |||||| || ||||| || ||| |||| Sbjct 8985 GTGATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATG 8926 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || || || || || ||||| Sbjct 8925 AAGGCACCGCGGTCGGCGGCCAT 8903 >seq528 Length=17027 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| ||||| |||||||| ||||| |||||||| || ||| Sbjct 15304 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCC 15363 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||| | || ||||||||||||||||| |||||||| |||||| Sbjct 15364 GATACCATTGATAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 15423 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| |||||||| | ||| ||||| | ||||| || Sbjct 15424 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTGTCGGACTACAAC 15483 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || ||| | || | |||||||| ||||| Sbjct 15484 ATTCAGAAGGAGTCGACCCTGCATTTGGTTCTCCGTCTTCGTGGTGG 15530 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| || ||| | ||||||||||| Sbjct 15076 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 15135 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| |||| | || ||||||||||||||||| |||||||| |||||| Sbjct 15136 GACACCATCGACAATGTGAAATCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 15195 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| |||||||| | ||| | || | ||||| || Sbjct 15196 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCCCTCTGTCCGACTACAAC 15255 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || |||||||| | ||| | |||||||||||||| Sbjct 15256 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGCGGTGG 15302 Score = 168 bits (186), Expect = 8e-37 Identities = 178/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | ||||| ||||| |||||||| ||||||||||| Sbjct 15760 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCG 15819 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || |||||||| |||||||| || || || |||||| Sbjct 15820 GACACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 15879 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||| | || |||||||||||||| |||||||||| | || || ||| |||||||| Sbjct 15880 CAGCGTTTGATCTTTGCTGGTAAGCAGCTCGAGGATGGGAGGACGCTGAGC-GACTATAA 15938 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| ||| ||||| | || | ||||||||||| || ||| Sbjct 15939 CATCCAGAAGGAGAGCACGCTTCACTTGGTGCTCCGTCTTCGCGGCGGCCAA 15990 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||| ||||| ||||| || || || ||||| Sbjct 15532 ATGCAAATCTTCGTTAAGACCCTCACCGGAAAGACAATTACGCTAGAAGTCGAGTCGTCG 15591 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| |||| || || || |||||||| || || || |||||| Sbjct 15592 GATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 15651 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| |||||||||| || ||||| | ||||| || Sbjct 15652 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGACTACAAC 15711 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || ||||| || | || || || ||||| Sbjct 15712 ATCCAGAAGGAGTCTACGCTACATCTTGTTCTCCGCCTCCGGGGTGG 15758 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||| ||||| |||| ||| | || | ||| Sbjct 14872 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACCATCGACAACGTTAAGAGC 14931 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || ||||||||||||||||| || |||||||| ||||| || || || || ||| Sbjct 14932 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 14991 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||| | || ||||| | ||||| || |||| ||||| || || || || Sbjct 14992 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 15051 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | ||||| |||||||| Sbjct 15052 TTGGTCCTTCGTCTGCGCGGTGG 15074 >seq790 Length=49868 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || ||||||||||| || |||||||| ||||| Sbjct 29516 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 29575 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||| | || || ||||||||||||||||| || || |||||| Sbjct 29576 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCAG 29635 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||||| || ||||| | || || || Sbjct 29636 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 29695 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| ||||| | ||| || | ||||| || || Sbjct 29696 ATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGAGACTTCGTGGAGG 29742 >seq724 Length=143787 Score = 140 bits (154), Expect = 4e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| | || |||||||| || || |||||||| ||||| |||| || Sbjct 12717 CTTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTAT 12776 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || || |||||||||||||||||||| ||||||||||| || Sbjct 12777 CGACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCT 12836 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || |||||||| ||||| |||||||||| || || || | ||||| || |||| || Sbjct 12837 GATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAA 12896 Query 27594 GG 27595 || Sbjct 12897 GG 12898 >seq1081 Length=56605 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767 |||| ||||||||||| || || || ||| || || || ||||| || || || ||| Sbjct 14503 TTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCCTTC 14444 Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827 || ||||||||||| || ||||| ||||| ||| | || ||| | || ||||||||| Sbjct 14443 GCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAG 14384 Query 64828 CTGATCTCTCGGGACGAGGGGCTCCAC 64854 || ||||| || || ||||| |||||| Sbjct 14383 CTCATCTCCCGTGATGAGGGTCTCCAC 14357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570297610789280