Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1761 87.8 2e-12 >seq1761 Length=22641 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34390 GGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCG 34449 |||||| || | ||||| |||||||| ||||||||| | ||||||||||| |||| || Sbjct 7489 GGAGGGTGATCTCGGCCCTGTCTACGGATTCCAGTGGCGGCACTTTGGGGCCAAGTA-CG 7547 Query 34450 GGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACA 34508 || || || ||||||| |||||||||| | || |||||| | | |||||| ||| Sbjct 7548 TGGACGCCCAGACGGACTACACGGGACAGGGTGTTGATCAGCTGGCGGAGGTGATCCACA 7607 Query 34509 CCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATC 34568 || | | || ||||| | | || | || | || |||||||| ||||| Sbjct 7608 AGCTGCGCCATACGCCGTATGACCGCCGAATTATCCTGAGTGCATGGAACCCCGCGGATC 7667 Query 34569 TCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618 | | ||||| || || ||||| |||| || || ||||||||| Sbjct 7668 TGAAGATCATGGCTCTGCCGCCGTGTCACATGTTCGCGCAGTTCTACGTC 7717 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 ||||||||| || || |||| ||||| || || ||||| | |||||| || Sbjct 7717 GACGTAGAACTGCGCGAACATGTGACACGGCGGCAGAGCCATGATCTTCAGATCCGCGGG 7658 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 |||||| || | || | || | | ||||| || | | || ||| |||||| Sbjct 7657 GTTCCATGCACTCAGGATAATTCGGCGGTCATACGGCGTATGGCGCAGCTTGTGGATCAC 7598 Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905 | | |||||| || | |||||||||| ||||||| || || || || |||| | Sbjct 7597 CTCCGCCAGCTGATCAACACCCTGTCCCGTGTAGTCCGTCTGGGCGTCCACG-TACTTGG 7539 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCC 6955 |||||||||| | ||||||||| |||||||| ||||| | || |||||| Sbjct 7538 CCCCAAAGTGCCGCCACTGGAATCCGTAGACAGGGCCGAGATCACCCTCC 7489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448252347715680