Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq790 149 1e-30
seq724 125 2e-23
seq1648 120 7e-22
seq528 118 3e-21
>seq790
Length=49868
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||||||| | ||| || ||||| || || |||| |||||||| | | ||
Sbjct 29737 ACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGT 29678
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || |||||||| || || || ||||| || || || ||
Sbjct 29677 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATTCC 29618
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||| || || || | ||||| || |
Sbjct 29617 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAG 29558
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||||| || || | ||| | ||||||
Sbjct 29557 GGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 29516
>seq724
Length=143787
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | ||| | ||||| || |||||||| ||||| |||||
Sbjct 12896 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 12837
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || ||||||||||||||||| ||| ||| |||
Sbjct 12836 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 12777
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| || || |||| || || || | ||||| |||||||||||||| || || | |||
Sbjct 12776 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 12718
>seq1648
Length=4763
Score = 120 bits (132), Expect = 7e-22
Identities = 198/281 (70%), Gaps = 5/281 (2%)
Strand=Plus/Minus
Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGA 7498
||| |||||||||||||| | | ||||| || ||||| |||||| ||||| |
Sbjct 4439 AACATTATATTTAATATTCGCTTTATTTTCAGG-ATTATTAGGTACAGCTTTTTCAGTCT 4381
Query 7499 TTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTT 7558
| || || ||||||||| || || ||| |||| ||| || | ||| ||| | |
Sbjct 4380 TAATTAGATTAGAATTAAGTGGACCTGGTGTTCAA-TATATAGCAG--ATAATCAATTAT 4324
Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618
| || ||| || || || || ||| | |||||||||||||| | |||||||| | ||
Sbjct 4323 ATAATAGTATAATAACAGCACACGCCATCCTTATGATTTTCTTTATGGTTATGCCAGCTA 4264
Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678
|||| || || || || |||| || | || | | | || | |||||||||||| |
Sbjct 4263 TGATTGGAGGATTTGGTAATTTTTTATTACCACTTTTAGTAGGGGGTCCTGATATGGCAT 4204
Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
| || || | || ||||||||||| |||||| |||| |||
Sbjct 4203 TCCCTAGATTAAATAATATAAGTTTCTGATTATTACCACCT 4163
Score = 86.0 bits (94), Expect = 1e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||||||||| || || |||||||| | |||||| || | |||||||| || || || |
Sbjct 3758 TTCAGGATGTCCGAAGAATCAGAAAAGATGTTGGTATAATATAGGATCACCACCACCAGC 3817
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| ||||| || ||||||||||||||||||||||||||
Sbjct 3818 AGCTTCAAAGAATGATGTATTAAAATTTCTATCAGTTAAAAC 3859
>seq528
Length=17027
Score = 118 bits (130), Expect = 3e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | |||||| || || || || |||| ||||| |||| | || | || ||
Sbjct 15059 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 15000
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| || ||||| ||||| || ||||| || |||||||||
Sbjct 14999 TCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 14940
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || |||||||| || || | || || || | ||||| |||
Sbjct 14939 TGGATCTTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATGGTC 14880
Query 225682 TTGCCCGTCA 225691
||||| ||||
Sbjct 14879 TTGCCAGTCA 14870
Score = 116 bits (128), Expect = 9e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | ||||| | ||| ||||| || || || || | ||||| |||| || ||
Sbjct 15296 CGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGGG 15237
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| || ||||| || || || || ||||| || ||||| ||
Sbjct 15236 CGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCC 15177
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| || ||||| |||||| ||||||||||| || | || || || ||
Sbjct 15176 TCCTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAA 15117
Query 225673 GTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 15116 GTGATGGTCTTGCCAGT 15100
Score = 107 bits (118), Expect = 5e-18
Identities = 148/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | || || || || || || || | ||||| || | || ||
Sbjct 15525 ACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGT 15466
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || ||||| || || || || ||||| || ||||||||
Sbjct 15465 GCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACC 15406
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| || ||||| ||| || || ||||| || || | |||||| || |
Sbjct 15405 CTCCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAG 15346
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||| |||||||||||||| | ||| ||
Sbjct 15345 CGTAATCGTCTTGCCCGTAAGAGTCTT 15319
Score = 107 bits (118), Expect = 5e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||| || || || || || || |||| ||||| || | || || | |||||
Sbjct 15743 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCC 15684
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||| || || || || ||||| || || || || ||||| |||
Sbjct 15683 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 15624
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || |||||||| || || | || || |||| ||| || |||
Sbjct 15623 TGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCTAGCGTAATTGTC 15564
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | || || | ||| | ||||||
Sbjct 15563 TTTCCGGTGAGGGTCTTAACGAAGATTTGCAT 15532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192503788925036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |