Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1037 161 1e-34
>seq1037
Length=26954
Score = 161 bits (178), Expect = 1e-34
Identities = 408/617 (66%), Gaps = 10/617 (2%)
Strand=Plus/Minus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
|| || ||||| || ||||||| |||||||||||||||| || |||||||| | | |
Sbjct 7923 TCGAACTCATCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTC 7864
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
||||| || | | || || || ||||| |||||||| || ||||| ||||| ||
Sbjct 7863 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCGTAGAAC 7804
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104
| || |||| | ||| || || || |||||| | | || || ||||| |
Sbjct 7803 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 7744
Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164
| ||| | |||||||| || | || || || | | | ||||| || || || || ||
Sbjct 7743 ACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCT 7684
Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224
|| || | || || |||||||| || | || | | ||| || | ||| ||||| ||
Sbjct 7683 TGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAG 7624
Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT---- 78280
|||| || || || | ||| || ||| | || || ||| |||||||
Sbjct 7623 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATA----CGGTGGATATTCAA 7568
Query 78281 CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACC 78340
|| || ||||| || |||| || || | || ||| || | ||| || ||||||||
Sbjct 7567 TCCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACC 7508
Query 78341 CTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGT 78400
||| || || || ||| |||||| | | || ||| |||| || || ||
Sbjct 7507 CTCAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGT 7448
Query 78401 TCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTA 78460
|| ||||| || | ||| || || || || || || |||| ||| | || |||||
Sbjct 7447 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 7388
Query 78461 TGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAACA 78519
||| || || | || || ||| || | ||||| || ||||| |||||||| | ||
Sbjct 7387 TGTCTCGATTGTCTTCTCAATATCCTCACCG-TGAATGCCCACCGCAACACGCATAATCA 7329
Query 78520 TATGCTGAGGTCTTTCA 78536
| ||||| || || |||
Sbjct 7328 TGTGCTGTGGCCTCTCA 7312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694653222052160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |