Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq528 168 1e-36 seq724 152 1e-31 seq790 145 2e-29 >seq528 Length=17027 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || ||||| || || ||||||| ||| || || |||||||||||||||| Sbjct 15759 ACCACCCCGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGA 15700 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || || |||| || || ||||| || Sbjct 15699 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGG 15640 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| ||||||||||| | || ||| ||||||| || ||||| | ||||| Sbjct 15639 GATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGAC 15580 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || ||||| || || | ||||||||||| || ||||| Sbjct 15579 TTCTAGCGTAATTGTCTTTCCGGTGAGGGTCTTAACGAAGATTTGCAT 15532 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||| || | |||||| || || |||||||| ||||| Sbjct 15986 CCGCCGCGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTATAGTCGCTC 15927 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| | |||||||| || || || || |||||||||||||| || ||||| || Sbjct 15926 AGCGTCCTCCCATCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGTGGG 15867 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || || ||||| | || ||| | || || |||||||||| || || Sbjct 15866 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACC 15807 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 15806 TCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 15760 Score = 154 bits (170), Expect = 3e-32 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| |||| || | || || || |||||||||||||| | Sbjct 15075 ACCACCGCGCAGACGAAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 15016 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| ||||| || ||||| ||||||| |||||| ||||| || Sbjct 15015 GAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGG 14956 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| |||||||||||||||||| ||||| || ||| | ||||| || || || | |||| Sbjct 14955 AATTCCCTCCTTGTCTTGGATC-TTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGA 14897 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077 | || || ||||| ||||| || |||| Sbjct 14896 CCTCAAGGGTGATGGTCTTGCCAGTCA 14870 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| ||| | || || || || ||||||||||| | Sbjct 15531 ACCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGA 15472 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || || |||| || || ||||| || Sbjct 15471 CAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGG 15412 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| || ||||| | || ||| |||| || || || || | ||| || Sbjct 15411 AATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCAC 15352 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| ||||| | |||||| || || |||||||| Sbjct 15351 CTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 15304 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| |||| || | || || || || ||||||||||| | Sbjct 15303 ACCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGA 15244 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || | ||| || ||||| || || || || || || |||| || || ||||| || Sbjct 15243 CAGAGGGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGG 15184 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | ||| || | ||||| ||||| || | || || Sbjct 15183 AATGCCCTCCTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCGGACGACTCAAC 15124 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| || || | ||||| || || |||||||| Sbjct 15123 CTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 15076 >seq724 Length=143787 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||| ||||| |||||||| || || || || ||||||||| Sbjct 12896 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 12837 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| ||||| |||||||||||||||||||| | || || | ||| Sbjct 12836 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 12777 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||||| || || | ||||| || || ||||| ||||| |||||||| ||||| ||||| Sbjct 12776 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 12718 >seq790 Length=49868 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || | || |||| || | ||| || || ||||||||||| || | Sbjct 29743 ACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 29684 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||| ||||||| || || ||||| || Sbjct 29683 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 29624 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | |||||||| || || | || || Sbjct 29623 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCAC 29564 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||||| ||||| ||||| || ||||| Sbjct 29563 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 29516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046715140045276