Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2510 113 1e-19
>seq2510
Length=23295
Score = 113 bits (124), Expect = 1e-19
Identities = 309/471 (66%), Gaps = 12/471 (3%)
Strand=Plus/Plus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
|||||| |||| || || |||| | ||||| ||||| | || ||||| |||
Sbjct 9525 TTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTC 9584
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
| | || || ||||| ||| ||| | ||| |||||||| | | || ||||||
Sbjct 9585 GCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTCACTTTCTCCAACGAG 9644
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTC 230352
||||| ||||| ||||||||||| | |||| | || | | || | ||
Sbjct 9645 CTCATCTCCCGCGATGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCGCACCTT 9704
Query 230353 -----CAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAA 230407
| | ||||| | || | | ||| | | |||| || || || || | |
Sbjct 9705 AGACACCGCCCAAGCAAGCA-----GGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGA 9759
Query 230408 ACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAAC 230467
||| | |||||| | || || | |||||| || | ||||||||||| |||
Sbjct 9760 TCGAGCAAGAGTTCTTGACAGAGGCACTCCCATGTGCGCTGCTCGGCATGAACGC-CAAC 9818
Query 230468 TT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526
|| ||| || ||||| || ||||| |||||| | | | || | || ||| |||||
Sbjct 9819 TTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTTTCTCTCGGTAACGAG 9878
Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586
|| | ||||| |||| |||||||| | || |||||| ||| || || ||| |||
Sbjct 9879 AAGTTCTACAAGTCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGCAGGAAAG 9938
Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||||||| || ||||||||| ||||| || | | ||||||| |||
Sbjct 9939 ACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAAAAGACTGGTGTCATG 9989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057778745297570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |