Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2510 113 1e-19 >seq2510 Length=23295 Score = 113 bits (124), Expect = 1e-19 Identities = 309/471 (66%), Gaps = 12/471 (3%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||||| |||| || || |||| | ||||| ||||| | || ||||| ||| Sbjct 9525 TTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTC 9584 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | | || || ||||| ||| ||| | ||| |||||||| | | || |||||| Sbjct 9585 GCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTCACTTTCTCCAACGAG 9644 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTC 230352 ||||| ||||| ||||||||||| | |||| | || | | || | || Sbjct 9645 CTCATCTCCCGCGATGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCGCACCTT 9704 Query 230353 -----CAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAA 230407 | | ||||| | || | | ||| | | |||| || || || || | | Sbjct 9705 AGACACCGCCCAAGCAAGCA-----GGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGA 9759 Query 230408 ACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAAC 230467 ||| | |||||| | || || | |||||| || | ||||||||||| ||| Sbjct 9760 TCGAGCAAGAGTTCTTGACAGAGGCACTCCCATGTGCGCTGCTCGGCATGAACGC-CAAC 9818 Query 230468 TT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526 || ||| || ||||| || ||||| |||||| | | | || | || ||| ||||| Sbjct 9819 TTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTTTCTCTCGGTAACGAG 9878 Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586 || | ||||| |||| |||||||| | || |||||| ||| || || ||| ||| Sbjct 9879 AAGTTCTACAAGTCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGCAGGAAAG 9938 Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||||| || ||||||||| ||||| || | | ||||||| ||| Sbjct 9939 ACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAAAAGACTGGTGTCATG 9989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057778745297570