Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2032 134 2e-26 >seq2032 Length=15395 Score = 134 bits (148), Expect = 2e-26 Identities = 209/296 (71%), Gaps = 12/296 (4%) Strand=Plus/Minus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 |||||||| |||||||||||| ||| ||||||| | |||||||||| ||| |||||| Sbjct 5687 AGCTGGTCGACGCCCTGCCCCGTGTAGTCTGTCTGAGCGTCCACGTACTTGGCGCCGAAG 5628 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGG----GCTCCCTGTGCCCCAG 146111 || | ||||||||| ||||| ||||| || || || || || ||||| || Sbjct 5627 TGACGCCACTGGAAGCCGTATACGGGGCCAAGATCACCCTCAACGCGATCTGTG----AG 5572 Query 146112 CCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGC 146171 |||| | ||||| || | || || || ||| | ||||||||||||| ||| Sbjct 5571 CCCGATGCTATCGAGGTAGGCACGCGATCCATTGCCATCCCAGATCTTGATGCCAGCACT 5512 Query 146172 GGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCC 146231 ||| || ||| ||||| || |||||||||||||| ||||| ||||||| | Sbjct 5511 GGAAAGGGGCAGGGATGAGGTGGAGCCGCTGATGAACCAGAGGAGCTCGGCGAGGACGGC 5452 Query 146232 CCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA-ACTGGCC---CCGCAGGGAG 146283 | |||||| | |||||| || || ||||||| | ||| | |||| ||||| Sbjct 5451 GCGGAGGAAGACGCGCTTGGTTGTGAGGAGGGGGAGAATGGGCGAGCCGCTGGGAG 5396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590052171669560